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nrminor-stats Public
Github stats for nrminor
Rust GNU General Public License v3.0 UpdatedDec 21, 2025 -
oneroof Public
Base-, Variant-, and Consensus-calling under One Proverbial Roof.
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.dotfiles Public
All the dotfiles I use to configure my bioinformatics and developer tools
Nushell MIT License UpdatedDec 17, 2025 -
sylph-tax Public
Forked from bluenote-1577/sylph-taxTaxonomy manipulation for sylph (new version)
Python MIT License UpdatedDec 16, 2025 -
nf-ospool Public
Experimental Nextflow executor plugin for running pipelines on the Open Science Grid via HTCondor
Groovy Apache License 2.0 UpdatedNov 21, 2025 -
nextflow Public
Forked from nextflow-io/nextflowA DSL for data-driven computational pipelines
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nvd-support-car Public
Experimental backend support service for https://github.com/dhoconno/nvd
Rust MIT License UpdatedNov 10, 2025 -
genotype Public
Type-Safe Bioinformatics in TypeScript
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paraseq Public
Forked from noamteyssier/paraseqA minimal copy fastq and fasta reader built for parallel support and paired end processing
Rust UpdatedOct 13, 2025 -
bqtools Public
Forked from ArcInstitute/bqtoolsA command line utilty for working with BINSEQ files
Rust UpdatedOct 9, 2025 -
deacon Public
Forked from bede/deaconDNA search and [host] depletion using minimizers
Rust MIT License UpdatedOct 9, 2025 -
xsra Public
Forked from ArcInstitute/xsraAn efficient CLI to extract sequences from the SRA
Rust UpdatedOct 1, 2025 -
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checkle Public
Interesting but unsuccessful prototype for running fast, parallel checksums. Use at your own risk!
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fqcat Public
Tool for rapidly combining Oxford Nanopore FASTQ files. Never use cat and find again!
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destroy_ds_stores Public
dds: a macOS .DS_Store file destroyer that's way more OP'd than it has any reason to be
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refman Public
A command-line manager for bespoke reference datasets used in bioinformatic analyses
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hash-browns Public
Metagenomic read classification well done.
Nextflow MIT License UpdatedApr 23, 2025 -
nvd Public
Forked from dhoconno/nvdOpinionated viral metagenomics workflow
Python GNU General Public License v3.0 UpdatedApr 18, 2025 -
nf-gottcha Public
A prototype Nextflow wrapper for running GOTTCHA2 on the CHTC HPC Slurm Cluster (and elsewhere)
Python MIT License UpdatedApr 12, 2025 -
tgv Public
Forked from zeqianli/tgvExplore genomes in the terminal. Light, blazing fast 🚀, vim-motion.
Rust MIT License UpdatedApr 12, 2025 -
dryice Public
(WIP) Fast, intermediate, and on-disk data representations for biological data. Don't put it in the minus-80—just put it on dry ice!
Rust MIT License UpdatedApr 10, 2025 -
rstrobes Public
Forked from marcelm/rstrobesRust port of strobealign (WIP)
Rust UpdatedApr 7, 2025 -
py-refman Public
Python Bindings for RefMan, a simple biological reference manager written in Rust
Rust MIT License UpdatedMar 24, 2025 -
give-a-sheet Public
Auto-generate type-validated, error-free input samplesheets for the nf-core pipeline you want to run. Pipeline support is limited at this stage, but more pipelines will be added in the future.
Rust MIT License UpdatedMar 6, 2025 -
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rosalind-solutions-py Public
Repo for my solutions to Rosalind Bioinformatics Problems
Python UpdatedNov 7, 2024
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