📚 《从零开始构建智能体》——从零开始的智能体原理与实践教程

🚀🚀 「大模型」2小时完全从0训练64M的小参数GPT！🌏 Train a 64M-parameter GPT from scratch in just 2h!

😼 优雅地使用基于 clash/mihomo 的代理环境

Awesome papers & datasets specifically focused on pathology.

Fabric is an open-source framework for augmenting humans using AI. It provides a modular system for solving specific problems using a crowdsourced set of AI prompts that can be used anywhere.

PrePATH: A parallel toolkit for Preprocessing WSI

Code for "SToFM: a Multi-scale Foundation Model for Spatial Transcriptomics".

A large scale benchmark for cross-modal learning of histology and spatial expressions

Official Codebase for "ER-Reason: A Benchmark Dataset for LLM-Based Clinical Reasoning in the Emergency Room"

text and image to video generation: CogVideoX (2024) and CogVideo (ICLR 2023)

Reference PyTorch implementation and models for DINOv3

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[ICLR 2025] Stem: Gene Expression Inference from Histology Images

Processed / Cleaned Data for Paper Copilot

Master programming by recreating your favorite technologies from scratch.

Let your Claude able to think

🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)

[MICCAI 2024] Official Code for "MambaMIL: Enhancing Long Sequence Modeling with Sequence Reordering in Computational Pathology"

Her2 Breast Cancer Project

Transcriptomics-guided Slide Representation Learning in Computational Pathology - CVPR 2024

Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology - CVPR 2024

Orthrus is a mature RNA model for RNA property prediction. It uses a mamba encoder backbone, a variant of state-space models specifically designed for long-sequence data, such as RNA.

[ICCV 2023] The official implementation of "Multimodal Optimal Transport-based Co-Attention Transformer with Global Structure Consistency for Survival Prediction".

Open source tools for computational pathology - Nature BME

Integrating histology and spatial transcriptomics - NeurIPS 2024