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@VanLoo-lab Cancer Genomics and Evolution Laboratory

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    6 repositories

    • ASCAT.sc

      Public
      HTML
      •
      GNU General Public License v3.0
      •14•24•4•0•Updated Dec 23, 2025Dec 23, 2025

    • gritic

      Public
      A tool for timing complex copy number gains in cancer.
      Python
      •
      GNU Affero General Public License v3.0
      •3•19•5•0•Updated Dec 4, 2025Dec 4, 2025

    • Arborist

      Public
      A tool to rank SNV phylogenies inferred from bulk DNA sequencing via low-pass scDNA-seq data.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•2•0•0•Updated Dec 4, 2025Dec 4, 2025

    • CAMDAC

      Public
      HTML
      •
      GNU General Public License v3.0
      •6•11•4•1•Updated Sep 22, 2025Sep 22, 2025

    • ascat

      Public
      ASCAT R package
      HTML
      •92•192•3•0•Updated Sep 18, 2025Sep 18, 2025

    • gritic_analysis

      Public
      Analysis scripts accompanying the manuscript for 'The history of chromosomal instability in genome doubled tumors'.
      Python
      •
      MIT License
      •0•1•0•0•Updated Jun 21, 2024Jun 21, 2024