MMseqs2: ultra fast and sensitive search and clustering suite

All Cursor AI's official download links for both the latest and older versions, making it easy for you to update, downgrade, and choose any version. 🚀

A friendly programming language from the future

A gitea version of the claude-code-action

AI agents running research on single-GPU nanochat training automatically

A nf-core pipeline for untargeted whole genome reconstruction with iSNV detection from metagenomic samples.

avantonder/assembleBAC-ONT is a bioinformatics pipeline that de novo assembles and annotates Oxford Nanopore (ONT) long-read sequence data.

ONT-based WSL Pipeline for Human SNV's and InDel's Detection and Annotation.

Basestack is a platform for rapid and real time analysis of NGS data. It provides a executable application that connects standard bionformatics tools to a user interface. It is usable on all major …

Nextflow workflow template repository

Nanoplot on EPI2ME. Written in Nextflow

An Epi2Me integrated tool to detect and classify RNA modifications.

Create static screenshots of genomic regions using IGV.

Example Nextflow pipelines and programming techniques

Script to automatically create and run IGV snapshot batchscripts

Script to automatically create and run IGV snapshot batchscripts

nextflow pipeline for NICD wastewater surveillance

Depth-weighted De-Mixing

Very basic Redmine Installer

Easily Do SSH SOCKS tunnelling

Examples of using Python with Posit Connect

Ray -- Parallel genome assemblies for parallel DNA sequencing

Dynamic Hierarchical Workflows via Generative Nextflow

🏆 A curated list of monetization approaches for open-source software. Feedback welcome!

A curated list of awesome resources for funding open source projects and authors.

Hypothesis extension for computational biology

V-pipe is a pipeline designed for analysing NGS data of short viral genomes

TaxTriage is a Nextflow workflow designed to agnostically identify and classify microbial organisms within short- or long-read metagenomic NGS data. This flexible tool was developed with various us…

The Generative AI Landscape - A Collection of Awesome Generative AI Applications