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nf-test Public
Forked from askimed/nf-testSimple test framework for Nextflow pipelines
Java MIT License UpdatedApr 10, 2026 -
cuteSV Public
Forked from tjiangHIT/cuteSVLong read based human genomic structural variation detection with cuteSV
Python MIT License UpdatedMar 26, 2026 -
nf-core-modules Public
Forked from nf-core/modulesRepository to host tool-specific module files for the Nextflow DSL2 community!
Nextflow MIT License UpdatedMar 26, 2026 -
nf-core-tools Public
Forked from nf-core/toolsPython package with helper tools for the nf-core community.
Python MIT License UpdatedMar 10, 2026 -
Spectre Public
Forked from fritzsedlazeck/SpectreCopy number caller for long read data including SNV utilization
Python MIT License UpdatedFeb 20, 2026 -
amazon-ecs-ami-for-nextflow Public
Forked from aws/amazon-ecs-amiPacker recipes for building the official ECS-optimized Amazon Linux AMIs modified to create an AMI that works for Nextflow on AWS Batch
Shell Apache License 2.0 UpdatedDec 31, 2025 -
bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell MIT License UpdatedSep 23, 2025 -
nf-core-test-datasets Public
Forked from nf-core/test-datasetsTest data to be used for automated testing with the nf-core pipelines
MIT License UpdatedMay 28, 2025 -
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sarek Public
Forked from nf-core/sarekAnalysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
Nextflow MIT License UpdatedFeb 1, 2025 -
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nf-validation Public
Forked from nextflow-io/nf-validationParams validation plugin for Nextflow pipelines
Groovy Apache License 2.0 UpdatedFeb 5, 2024 -
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ensembl-datacheck Public
Forked from Ensembl/ensembl-datacheckCode for checking Ensembl databases during release production
Perl Apache License 2.0 UpdatedAug 3, 2021 -
SublimeLinter-perlcritic Public
Forked from oschwald/SublimeLinter-perlcriticperlcritic linter for SublimeLinter3
Python MIT License UpdatedApr 23, 2021 -
misc-analysis Public
A repo for analysis of a variety of data on different topics and sources
Python UpdatedMar 12, 2021 -
open-source-football Public
Forked from nflverse/open-source-footballRepository of the Open Source Football Website (see link below)
HTML UpdatedSep 26, 2020 -
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pyrugby Public
A set of python modules for scraping various rugby and rugby-related data from the web
Python UpdatedJun 17, 2020 -
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sportsref Public
Forked from mdgoldberg/sportsrefScraping sports data from sports-reference.com and related sites in Python
Python GNU General Public License v3.0 UpdatedFeb 4, 2018
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