data/			: Data model for the alignments (read, read alignment, cds alignment...)
|__ containers/ : Containers which hold all the loaded data (records, reads and cdss)
formats/		: 	Format parsing. (blast ecc)
ncbi/			
|__ .data/		: Holds NCBI taxonomy tree data
|__ db/			: MySQL data model and access to GenBank, EMBL and NCBI taxonomy 
|__ taxonomy	: Taxonomy tree structure 
snippets/		:	Examples of running parts of the app.
tests/			: 	Unit tests for some parts of the application
utils/			: 	Parts of application needed everywhere.