CLIP (Contrastive Language-Image Pretraining), Predict the most relevant text snippet given an image

A game theoretic approach to explain the output of any machine learning model.

TensorFlow Tutorials with YouTube Videos

Code Repository for Machine Learning with PyTorch and Scikit-Learn

MONAI Tutorials

An interactive data visualization tool which brings matplotlib graphics to the browser using D3.

Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks. Support: https://discourse.slicer.org/c/community/radiomics

This repo is the homebase of a community driven course on Computer Vision with Neural Networks. Feel free to join us on the Hugging Face discord: hf.co/join/discord

Croissant is a high-level format for machine learning datasets that brings together four rich layers.

Segment Anything for Microscopy

ZeroCostDL4Mic: A Google Colab based no-cost toolbox to explore Deep-Learning in Microscopy

Open source Python library for building bioimage analysis pipelines

Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools and AI tools.

NSCI 801 (Queen's U) Quantitative Neuroscience course materials

an extension that wraps a Cellpose environment such that WSI can be analyzed using Cellpose through QuPath.

Creating figures and animations for multi-channel images with a focus on microscopy.

Bioinformatics in Python

Fusing image tiles with dask array's map_blocks

Optimizing the Cell Painting assay for image-based profiling

Dask Tutorial for PyData Seattle 2017

Material to showcase and test several tools and packages releated to ZEN, CZI image files and python packages related to those topics