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Commits on Apr 18, 2024

• Merge pull request #32 from akcorut/akcorut-patch-1

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• Update README.md

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Commits on Oct 7, 2023

• Merge pull request #23 from akcorut/release-please--branches--main

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• chore: update release-as to 1.3.0

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• feat: add a mock test dataset for faster test run

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• fix: fixed the issues with na p-values

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• fix: make igv_report optional so the pipeline can run without providing a gff/gtf file

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• feat: add an option to rename duplicates before seqkit sort

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• chore: update config_ecoli based on main config

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• feat: update main config.yaml

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• chore: update version to 1.3 + citations

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• Update .gitignore

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Commits on Sep 19, 2023

• Merge pull request #11 from akcorut/release-please--branches--main

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• chore: update version name

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• chore: set release version

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• fix: fixed typo in rule bowtie2_build (#19)

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• perf: changed snakemake to snakemake-minimal

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Commits on Aug 25, 2023

• docs: added more informative CL messages (#18)

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Commits on Aug 24, 2023

• docs: fixed typos where --output should be --work-dir

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Commits on Jul 18, 2023

• Update README.md

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• Update README.md

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Commits on Jul 13, 2023

• chore: update citation

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• Update README.md

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Commits on Jul 10, 2023

• chore: update Dockerfile

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Commits on Jun 22, 2023

• Update README.md

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• Update README.md

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• Update README.md

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• Update README.md

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Commits on Jun 21, 2023

• chore: update version

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• feat: add user defined manhattan plot parameters

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• docs: add help message for cluster execution

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• chore: remove release-as param

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• fix: fixed qmplot link for the report

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• refactor: change default figure, font and label sizes

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• refactor: change default figure and font sizes

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