Skip to content
View alancleary's full-sized avatar

Organizations

@ncgr @TileDB-Inc

Block or report alancleary

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don't include any personal information such as legal names or email addresses. Markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
Showing results

The FastPFOR C++ library: Fast integer compression

C++ 946 131 Updated Dec 18, 2025

The Universal Storage Engine

C++ 2,009 203 Updated Dec 23, 2025

Efficient, parallel compression for terabyte-scale data

C++ 55 2 Updated Sep 27, 2025

Python and R SOMA APIs using TileDB’s cloud-native format. Ideal for single-cell data at any scale.

Python 118 30 Updated Dec 24, 2025

Efficient variant-call data storage and retrieval library using the TileDB storage library.

C++ 99 20 Updated Dec 11, 2025
C 4 1 Updated Sep 26, 2019

Embed Neovim in Chrome, Firefox & others.

TypeScript 5,914 160 Updated Sep 30, 2025

Building the compacted de Bruijn graph efficiently from references or reads.

C++ 92 12 Updated May 1, 2025

A TypeScript library for consistent coloring of visualizations by genus & species.

TypeScript 1 Updated May 6, 2025

A GraphQL server that supports the Legume Information System and related biodata websites

TypeScript 3 3 Updated Dec 2, 2025

Postmodern immutable and persistent data structures for C++ — value semantics at scale

C++ 2,664 195 Updated Dec 2, 2025

Collections of awesome neovim plugins.

Shell 19,757 917 Updated Dec 24, 2025

Nvim Treesitter configurations and abstraction layer

Tree-sitter Query 12,981 1,070 Updated Dec 21, 2025

Zotero is a free, easy-to-use tool to help you collect, organize, annotate, cite, and share your research sources.

JavaScript 13,056 918 Updated Dec 24, 2025

A post-modern modal text editor.

Rust 42,032 3,219 Updated Dec 23, 2025

🌺 Minimalist Vim Plugin Manager

Vim Script 35,453 1,956 Updated Nov 6, 2025

☄🌌️ The minimal, blazing-fast, and infinitely customizable prompt for any shell!

Rust 52,958 2,318 Updated Dec 24, 2025

A cross-platform, OpenGL terminal emulator.

Rust 61,553 3,248 Updated Dec 23, 2025

Iconic font aggregator, collection, & patcher. 3,600+ icons, 50+ patched fonts: Hack, Source Code Pro, more. Glyph collections: Font Awesome, Material Design Icons, Octicons, & more

CSS 60,954 3,853 Updated Dec 22, 2025

Official implementation for HyenaDNA, a long-range genomic foundation model built with Hyena

Assembly 743 103 Updated Apr 22, 2025

A modern Python package and dependency manager supporting the latest PEP standards

Python 8,533 463 Updated Dec 24, 2025

Succinct Data Structure Library 2.0

C++ 2,289 355 Updated Jun 2, 2023
Rust 1 Updated Oct 29, 2019

A collection of Web Components for interacting with and visualizing biological data.

TypeScript 5 3 Updated Oct 30, 2025

legumeinfo.org built with Jekyll and served on GitHub Pages

HTML 4 1 Updated Oct 1, 2025

A Jekyll site that demonstrates how to use the legumeinfo Jekyll theme

HTML 1 1 Updated Oct 1, 2025

A Jekyll theme for the Legume Information System and related biodata websites

JavaScript 1 1 Updated Oct 1, 2025

Resources for running the Genome Context Viewer with Docker Compose

Shell 2 1 Updated Nov 21, 2025

CLI11 is a command line parser for C++11 and beyond that provides a rich feature set with a simple and intuitive interface.

C++ 4,040 415 Updated Dec 23, 2025

Roaring bitmaps in C (and C++), with SIMD (AVX2, AVX-512 and NEON) optimizations: used by Apache Doris, ClickHouse, Alibaba Tair, Redpanda, YDB and StarRocks

C 1,740 303 Updated Dec 16, 2025
Next