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PxBLAT: An Efficient and Ergonomic Python Binding Library for BLAT

C 18 Updated Mar 19, 2026

Latex code for making neural networks diagrams

TeX 24,552 3,047 Updated Aug 21, 2023

new reading environment for version 5.0 of the Perseus Digital Library

Vue 95 18 Updated Mar 23, 2026

A simple, extensible LLM client for Emacs

Emacs Lisp 3,265 372 Updated Mar 25, 2026

Explore genomes in the terminal. Light, blazing fast 🚀, vim-motion.

Rust 446 19 Updated Mar 25, 2026

Box model code, analysis routines, and large model ensemble data characterizing the "ligand-iron-microbe" feedback

Jupyter Notebook 4 Updated Sep 17, 2021

Main application code for Ambuda, a breakthrough Sanskrit library (ambuda.org)

Python 112 32 Updated Mar 22, 2026

Versatile command-line tool designed to create publication quality genomic neighborhood plots built on top of DnaFeaturesViewer

Python 3 Updated Mar 27, 2020

Python package for indic script transliteration

Python 204 41 Updated Mar 25, 2026

Transliteration packages for Indian scripts

40 10 Updated Apr 18, 2013
Python 1 Updated Feb 13, 2024
3 Updated Jan 14, 2021

Code and data for "Quantitatively assessing early detection strategies for mitigating COVID-19 and future pandemics."

2 Updated Nov 16, 2023

Historical Emacs Software Preservation

C 302 21 Updated Apr 16, 2025

Emacs extension for biological sequences

Emacs Lisp 7 1 Updated Feb 7, 2026

An Emacs API wrapper for Saccharomyces Genome Database (SGD).

Emacs Lisp 3 Updated Dec 21, 2022

Emacs calibre client - A Document Management Solution in Emacs.

Emacs Lisp 370 18 Updated Sep 13, 2025

Never lose your place in Emacs again

Emacs Lisp 222 11 Updated Jun 15, 2024

A tool to find sequencing data and metadata from public databases.

Python 597 48 Updated Aug 13, 2024

Add graphical view of agenda to agenda buffer

Emacs Lisp 183 19 Updated Nov 10, 2021

Evaluate math expression at point using calc-eval

Emacs Lisp 17 2 Updated Aug 12, 2025

Xournal++ is a handwriting notetaking software with PDF annotation support. Written in C++ with GTK3, supporting Linux (e.g. Ubuntu, Debian, Arch, SUSE), macOS and Windows 10. Supports pen input fr…

C++ 14,522 1,028 Updated Mar 24, 2026

A dynamic data-driven document development environment (DDDDDE)

TypeScript 87 7 Updated Mar 4, 2023

Curated (meta)list of resources for Biology.

430 53 Updated Jan 15, 2024

Scripts and analysis of C. deneoformans cross between XL280 X 431

Jupyter Notebook 6 Updated Feb 4, 2021

emacs fasta simple package (bioinformatics)

Emacs Lisp 3 Updated Oct 8, 2017

Plumbum: Shell Combinators

Python 3,029 196 Updated Mar 13, 2026

Official git repository for Biopython (originally converted from CVS)

Python 4,932 1,877 Updated Mar 16, 2026
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