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PxBLAT: An Efficient and Ergonomic Python Binding Library for BLAT

C 18 Updated Feb 5, 2026

Latex code for making neural networks diagrams

TeX 24,414 3,043 Updated Aug 21, 2023

new reading environment for version 5.0 of the Perseus Digital Library

Vue 93 16 Updated Feb 4, 2026

A simple, extensible LLM client for Emacs

Emacs Lisp 3,153 357 Updated Feb 6, 2026

Explore genomes in the terminal. Light, blazing fast 🚀, vim-motion.

Rust 434 17 Updated Jan 28, 2026

Box model code, analysis routines, and large model ensemble data characterizing the "ligand-iron-microbe" feedback

Jupyter Notebook 4 Updated Sep 17, 2021

Main application code for Ambuda, a breakthrough Sanskrit library (ambuda.org)

Python 108 31 Updated Feb 6, 2026

Versatile command-line tool designed to create publication quality genomic neighborhood plots built on top of DnaFeaturesViewer

Python 3 Updated Mar 27, 2020

Python package for indic script transliteration

Python 200 40 Updated Jan 31, 2026

Transliteration packages for Indian scripts

39 10 Updated Apr 18, 2013
Python 1 Updated Feb 13, 2024
3 Updated Jan 14, 2021

Code and data for "Quantitatively assessing early detection strategies for mitigating COVID-19 and future pandemics."

2 Updated Nov 16, 2023

Historical Emacs Software Preservation

C 292 21 Updated Apr 16, 2025

Emacs extension for biological sequences

Emacs Lisp 7 1 Updated Mar 4, 2025

An Emacs API wrapper for Saccharomyces Genome Database (SGD).

Emacs Lisp 3 Updated Dec 21, 2022

Emacs calibre client - A Document Management Solution in Emacs.

Emacs Lisp 368 18 Updated Sep 13, 2025

Never lose your place in Emacs again

Emacs Lisp 222 10 Updated Jun 15, 2024

A tool to find sequencing data and metadata from public databases.

Python 593 47 Updated Aug 13, 2024

Add graphical view of agenda to agenda buffer

Emacs Lisp 184 19 Updated Nov 10, 2021

Evaluate math expression at point using calc-eval

Emacs Lisp 17 2 Updated Aug 12, 2025

Xournal++ is a handwriting notetaking software with PDF annotation support. Written in C++ with GTK3, supporting Linux (e.g. Ubuntu, Debian, Arch, SUSE), macOS and Windows 10. Supports pen input fr…

C++ 14,265 1,005 Updated Feb 7, 2026

A dynamic data-driven document development environment (DDDDDE)

TypeScript 85 6 Updated Mar 4, 2023

Curated (meta)list of resources for Biology.

420 50 Updated Jan 15, 2024

Scripts and analysis of C. deneoformans cross between XL280 X 431

Jupyter Notebook 6 Updated Feb 4, 2021

emacs fasta simple package (bioinformatics)

Emacs Lisp 3 Updated Oct 8, 2017

Plumbum: Shell Combinators

Python 3,020 195 Updated Jan 27, 2026

Official git repository for Biopython (originally converted from CVS)

Python 4,891 1,864 Updated Jan 26, 2026
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