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amro-hashish/README.md

Hello, I am Dr. Amro Hashish πŸ‘‹


🧬 About Me

I am a veterinary molecular diagnostician and bioinformatics researcher specializing in molecular diagnostics, microbial genomics, pathogen surveillance, and recombinant vaccine development for poultry infectious diseases.

My work integrates wet-lab molecular and virological techniques to improve pathogen detection, including sequencing-based diagnostics, genomic epidemiology, and translational research applications in poultry medicine.

Currently focused on:

  • NGS applications in veterinary diagnostics
  • Molecular epidemiology of avian pathogens
  • Recombinant vector vaccine development
  • Comparative microbial genomics
  • Pathogen surveillance and genomic characterization
  • Translational diagnostics for poultry health

πŸ”¬ Research Interests

  • Molecular Diagnostics
  • Microbial Genomics
  • Bioinformatics
  • NGS Applications
  • Comparative Genomics
  • Pathogen Surveillance
  • Recombinant Vaccines
  • Poultry Infectious Diseases
  • Molecular Epidemiology
  • Veterinary Genomics

πŸ§ͺ Bioinformatics & Molecular Tools

BLAST β€’ MAFFT β€’ IQ-TREE β€’ MEGA β€’ SPAdes β€’ QUAST
FastQC β€’ Kraken2 β€’ Prokka β€’ Galaxy β€’ SeqSphere+
Nanopore Sequencing β€’ Illumina NGS β€’ cgMLST

πŸ“Š Scientific Highlights

  • 🧬 30+ peer-reviewed publications
  • 🎀 40+ conference presentations
  • πŸ’° Contributor to funded research projects exceeding $1.6M
  • πŸ§ͺ Developed and validated multiple molecular diagnostic assays
  • πŸ” Specialized in poultry infectious disease genomics
  • 🧫 Experience in recombinant vector vaccine development
  • 🧬 Implemented NGS and Nanopore sequencing workflows in diagnostics

🌍 Connect With Me


"From sequences to solutions β€” advancing animal health through science and innovation."

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