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LLM-powered personalized daily lists of scientific papers
High-performance UMI tools for NGS data analysis
This repository contains examples of Dockerfiles for custom Seqera studio applications.
A native macOS menu bar app for controlling your smart home devices.
Metro-map-style SVG diagrams from Mermaid graph definitions, designed for visualizing bioinformatics pipeline workflows
An open-source cross-platform alternative to AirDrop
Add your HDD, SSD and NVMe drives to your Synology's compatible drive database and a lot more
Generate plottable back side text for your PTPX cards
A tool to easily create OpenStreetMap SVG maps to plot them with a pen plotter.
Resources for the CMU Drawing with Machines Course
Python implementation and field-tool for automated pipeline launching through Tower CLI (beta)
Weather4Lox: A LoxBerry Plugin
Joplin - the privacy-focused note taking app with sync capabilities for Windows, macOS, Linux, Android and iOS.
A simple way to detect changes in website using GitHub Actions and be notified about changes.
Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq
Workflow for preprocessing cfDNA samples.
🌐 Make websites accessible for AI agents. Automate tasks online with ease.
Estimating tumor fraction in cell-free DNA from ultra-low-pass whole genome sequencing.
An automated document analyzer for Paperless-ngx using OpenAI API, Ollama, Deepseek-r1, Azure and all OpenAI API compatible Services to automatically analyze and tag your documents.
Algorithm to implement Fraction and Copy number Estimate from Tumor/normal Sequencing.
A gateway to query available CardDAV Addresses in Grandstream XML format via HTTP
Analysis pipeline to model tumour clonal evolution from WGS data (driver annotation, quality control of copy number calls, subclonal and mutational signature deconvolution)
Official source code of FreeCAD, a free and opensource multiplatform 3D parametric modeler.
nf-core/references is a bioinformatics pipeline that build references, for multiple use cases
Integrated Machine Learning for Multi-omics Classification and Prediction
Nextflow plugin to render provenance reports for pipeline runs. Supports standard formats such as BioCompute Object and Workflow Run RO-Crate.