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Collection of utilities that are not polished implementations but can be useful to users

Python 90 32 Updated Sep 23, 2025

Diagrams for visualizing neural network architecture

1,016 517 Updated Apr 12, 2025

Pixel-by-pixel detector calibration for quantitative direct imaging and suppression of CT ring artefacts

Python 18 2 Updated Apr 26, 2022

Build clever, class-based command line apps with minimal boilerplate

Python 1 Updated Sep 2, 2025

Create volumetric mesh from segmentation using Cleaver2 or TetGen

Python 32 22 Updated Jun 27, 2024

A library for painless 3D tomographic reconstruction

Jupyter Notebook 101 20 Updated Apr 30, 2025

Utilities for reading and writing files created by 3D Slicer

Python 41 3 Updated Jan 28, 2025

It's an implementation of Efros and Freeman's "Image Quilting and Texture Synthesis" 2001

Python 43 18 Updated Mar 23, 2016
Jupyter Notebook 1 Updated Oct 8, 2025

Numerical techniques for ring artifact removal in tomography https://sarepy.readthedocs.io/

Python 58 14 Updated Feb 12, 2025

image registration related books, papers, videos, and toolboxes

1,486 176 Updated Oct 5, 2025

SimpleITK: a layer built on top of the Insight Toolkit (ITK), intended to simplify and facilitate ITK's use in rapid prototyping, education and interpreted languages.

SWIG 1,028 223 Updated Dec 20, 2025

An ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of images

Python 260 26 Updated Dec 17, 2025

Advanced Normalization Tools (ANTs)

C++ 1,402 394 Updated Dec 21, 2025

A Pytorch implementation of the mixed-scale dense network described in https://doi.org/10.1073/pnas.1715832114

Python 24 10 Updated Nov 8, 2023

A program to evaluate the quality of image segmentations.

C++ 326 92 Updated Dec 25, 2021

A collection of C++ source code modules for forward and inverse simulations of Unified Tomographic Reconstruction.

C++ 6 3 Updated Mar 30, 2023

Launch JupyterLab instances on Spartan interactive nodes

Janet 2 Updated Dec 16, 2024

3D Slicer extension for Segment Anything Model (SAM) developed by Meta

Python 68 7 Updated Jun 2, 2025

A wrapper for PyTorch projects to create easy command-line inferfaces and manage hyper-parameter tuning

Python 6 3 Updated Sep 2, 2025

Measures and metrics for image2image tasks. PyTorch.

Python 1,552 120 Updated May 12, 2024

ECCV18 Workshops - Enhanced SRGAN. Champion PIRM Challenge on Perceptual Super-Resolution. The training codes are in BasicSR.

Python 6,516 1,129 Updated Oct 19, 2022

Fast and differentiable MS-SSIM and SSIM for pytorch.

Python 1,227 128 Updated Mar 12, 2024

Attention-guided CNN for image denoising(Neural Networks,2020)

Python 123 6 Updated Feb 12, 2023

This repository includes implementation of CTformer on Low-dose CT Denoising

Python 76 10 Updated Apr 4, 2022

A collection of resources on applications of Transformers in Medical Imaging.

1,282 192 Updated Apr 18, 2024
Jupyter Notebook 68 12 Updated Jul 18, 2022

Extraction of 3D skeletons from meshes.

Python 247 29 Updated Dec 2, 2025

img2table is a table identification and extraction Python Library for PDF and images, based on OpenCV image processing

Python 838 120 Updated Nov 9, 2025

Survival analysis with PyTorch

Python 940 206 Updated Sep 4, 2024
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