An Open Source implementation of Notebook LM with more flexibility and features

A single CLAUDE.md file to improve Claude Code behavior, derived from Andrej Karpathy's observations on LLM coding pitfalls.

python implementation of the PAGE algorithm

View your Google Maps Timeline (Location History) data

Upload PDFs to the reMarkable Cloud, which is particularly useful on Linux as the official desktop application is not available.

A universal HMM-based peak caller capable of processing a broad range of ChIP-seq, ATAC-seq, and single-cell ATAC-seq datasets of different quality.

Scientific Inkscape: Inkscape extensions for figure resizing and editing

Accelerating ggplot2

MSigDB gene sets for multiple organisms in a tidy data format

R's data.table package extends data.frame:

Fast hashing functions and replacement of match()

Blocks specific sites from appearing in Google search results

Linear optimization software

A python toolbox for 13C metabolic flux analysis

COnstraint-based Reconstruction and Analysis (COBRA) of metabolic networks in R

Wrapper for running gperftools in R

A faster implementation of i3lock-fancy.

i3lock script that takes a screenshot of the desktop, blurs the background and adds a lock icon and text

NMF and complete deconvolution algorithm

Package to benchmark methods from decoupleR

GAM-clustering: Metabolic Modules Derivig From RNAseq Data

Give your MIDI devices super powers: take control of the lights, messages, and communication between controllers.

Reverse enginneered MIDI implementation of Launchkey Mini MK3 by Novation

A concept for guitar to midi as an lv2 plugin

Combines all HiCT-related repositories as submodules

A Toolbox for Spatial Transcriptomics Analysis