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20 stars written in R
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Hugging Face state-of-the-art models in R

R 160 17 Updated Jan 28, 2023

Tools to deal with dependencies in scripts, Rmd and packages

R 110 13 Updated Jun 13, 2025

⚠️ ARCHIVED ⚠️ A programmatic interface the Orcid.org API

R 109 15 Updated May 6, 2024

A dynamic database of fungal trait measurements

R 78 9 Updated Feb 26, 2020

R bindings to TMB

R 71 11 Updated Oct 17, 2025

Ansible role to set up (the latest version of) R in Ubuntu systems

R 44 27 Updated Dec 10, 2024

📦 Taxonomic Database

R 43 13 Updated Apr 15, 2024

⛔ ARCHIVED ⛔ Send Live Status, Progress and Other Information Between Functions and Processes

R 33 Updated May 10, 2022

R + Redis queues

R 33 9 Updated Sep 23, 2019

Phylogenetic Comparative Tools for Missing Data and Within-Species Variation

R 32 11 Updated Jan 15, 2023

Dynamically Generate Quarto Syntax

R 20 Updated Jul 7, 2025

R Interfaces to Phylogenetic Software

R 12 3 Updated Sep 15, 2025

Deriving and quantifying the impact of biomedical research publications

R 10 2 Updated Mar 24, 2025

R Shiny Apps

R 6 8 Updated Mar 7, 2013

Many-task pipelines using targets

R 4 6 Updated Sep 19, 2023

R package to simplify the usage of the RDS REST API and provide convenience in accessing data and metadata.

R 4 Updated Jul 28, 2023

Code for producing the History of Earth phylotastic educational resources website

R 3 Updated Jul 20, 2019
R 2 1 Updated Oct 22, 2025

Code from Lundgren et al "Combining biomarker and virus phylogenetic models improves epidemiological source identification" in PLOS Computational Biology 2022 Aug 26;18(8):e1009741

R 1 1 Updated Feb 10, 2025