IntrA: 3D Intracranial Aneurysm Dataset for Deep Learning

State-of-the-art medical image registration methods

SOTA medical image segmentation methods based on various challenges

Foundation Models for Biomedical Image Segmentation

Fast segmentation pipeline for brain MRI

MICCAI 2019-2023 Open Source Papers

opencode operation view UI

아래한글 hwp viewer and editor by rust and wasm

DSPy: The framework for programming—not prompting—language models

Guide to perform cerebral blood flow (CBF) processing on an arterial spin labelling (ASL) image with ANTs and FSL. The required codes are provided and explained.

A single CLAUDE.md file to improve Claude Code behavior, derived from Andrej Karpathy's observations on LLM coding pitfalls.

MELD classifier using Geometric Deep Learning

Neural network classifier for MELD

ggseg3d R package for visualising brain atlases through plotly

Blink Mobile Shell for iOS (Mosh based)

Run OpenClaw more securely inside NVIDIA OpenShell with managed inference

Fusion framework for management of functional imaging datasets

Data and code supporting Hansen et al., 2024, Nature Neuroscience "Integrating brainstem and cortical functional architectures"

A pythonic 3D viewer to visualize and plot brains and neuroimaging data

Code for processing DTI data and performing tractography analyses

codes for paper accepted in IPMI2025 titled: ''MAD-AD: Masked Diffusion Autoencoder for Unsupervised Brain Anomaly Detection"

Large-scale semi-supervised framework with 1B+ labeled masks from 48K+ datasets with test-time adaptation to new domains (ICCV 2025).

[MICCAI, 2024] (Oral, RU @ MedIA Best Paper Award) Official implementation of the Brain Latent Progression (BrLP) method from "Enhancing Spatiotemporal Disease Progression Models via Latent Diffusi…

The repository provides code for running inference and finetuning with the Meta Segment Anything Model 3 (SAM 3), links for downloading the trained model checkpoints, and example notebooks that sho…

Finetune SAM3 with LoRA — optimized for images. A simple setup for training SAM3 on image datasets. Video finetuning is not yet supported but planned for future releases.

MedSAM3: Delving into Segment Anything with Medical Concepts

PaperBanana: Automating Academic Illustration For AI Scientists