aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)

Draw pretty maps from OpenStreetMap data! Built with osmnx +matplotlib + shapely

My implementation of the original GAT paper (Veličković et al.). I've additionally included the playground.py file for visualizing the Cora dataset, GAT embeddings, an attention mechanism, and entr…

A few exercises for use at events.

A library for creating complex UpSet plots with ggplot2 geoms

experiments with python

Using R with Jupyter / RStudio on Binder

🧪 Simple data science experimentation & tracking with jupyter, papermill, and mlflow.

Templates for jupyter notebooks

OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies

Simple data science website using Jupyter notebooks.

BioBombe: Sequentially compressed gene expression features enhances biological signatures

Brain decoding/encoding with neural network language models

📝 A blog post about report generation and automation in python

Documentation for the DALEX project

Material for the Jupytext+Papermill blog post

Example of how to use R in Jupyter notebooks and make compatible with Binder

Find hot data sets in your area (of research)!

Notebooks in computational metabolomics

Find structured-datasets from within the Sequence Read Archive

Processing the RDF:OWL Gene Ontology with rdflib and visualising small networks of class relations.

Hello, Papermill~

Resources for the Pilot Online Course "Dry bench skills for Researchers"