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We report a section-wide NLRome for the tuber-bearing section Petota, including the most important non-cereal food crop potato. Evolutionary genomics and functional analyses discover new late bligh…
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Designing antimicrobial peptides (AMPs) is awesome.
🤗 Diffusers: State-of-the-art diffusion models for image, video, and audio generation in PyTorch.
HydrAMP: a deep generative model for antimicrobial peptide discovery
Code for paper "ToxIBTL: prediction of peptide toxicity based on information bottleneck and transfer learning"
A novel approach to the classification of antimicrobial peptides (AMPs) using pre-trained language models to create contextual vectorized embeddings of each peptide sequence before a convolutional …
LLMs for high-throughput mining and generation of antimicrobial peptides
Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.
Antimicrobial Peptide Structural Evolution Miner (AMP-SEMiner), an integrated AI framework designed for the simultaneous identification of antimicrobial peptides (AMPs) as small open reading frames…
Fitness landscape exploration sandbox for biological sequence design.
Toolbox for molecular animations in Blender, powered by Geometry Nodes.
Predicting high-fitness mutations based on protein inverse folding models
Efficient few-shot learning with Sentence Transformers
including unet,unet++,attention-unet,r2unet,cenet,segnet ,fcn.
Notebooks to recreate paper figures
U-Mamba: Enhancing Long-range Dependency for Biomedical Image Segmentation
🤖 𝗟𝗲𝗮𝗿𝗻 for 𝗳𝗿𝗲𝗲 how to 𝗯𝘂𝗶𝗹𝗱 an end-to-end 𝗽𝗿𝗼𝗱𝘂𝗰𝘁𝗶𝗼𝗻-𝗿𝗲𝗮𝗱𝘆 𝗟𝗟𝗠 & 𝗥𝗔𝗚 𝘀𝘆𝘀𝘁𝗲𝗺 using 𝗟𝗟𝗠𝗢𝗽𝘀 best practices: ~ 𝘴𝘰𝘶𝘳𝘤𝘦 𝘤𝘰𝘥𝘦 + 12 𝘩𝘢𝘯𝘥𝘴-𝘰𝘯 𝘭𝘦𝘴𝘴𝘰𝘯𝘴
Development repository for the Triton language and compiler
This API provides programmatic access to the AlphaGenome model developed by Google DeepMind.