Stars
MassSpectrum-Analyzer is a tool for analysis of peptide spectral data
Helios: a unified API for both Exploris and Tribrid MS instruments.
Open-source C++ and Python module for opening binary timsTOF data files.
timsplot: A Python Shiny App for Visualizing tims-TOF Proteomics Results
A simple tool to help you manually discover the depths of your (complex) spectra, one spectrum at a time.
Glycan Analysis and Glycoinformatics Library for Python
Estimation of false discovery proportion for mass spectrometry proteomics data using entrapment
R package for calculation and mass spectrometry annotation of glycans
ABRF sPRG project to produce a hybrid proteome standard for LC-MS quantitative benchmarking
Proteomics search & quantification so fast that it feels like magic
De Novo Mass Spectrometry Peptide Sequencing with a Transformer Model
This is a program that makes tomahaq methods and allows users to view the data.
Analysis code used in the manuscript "Comparison of unit resolution versus high-resolution accurate mass for parallel reaction monitoring"
Comparing glycoprofiles, leveraging motif substructure arithmetic
Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities
The ProteoWizard Library is a set of software libraries and tools for rapid development of mass spectrometry and proteomic data analysis software.