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final-nn-cb Public
Forked from bmi203-2023/final-nnImplement a generic neural network class and use it for autoencoding and classifying.
Jupyter Notebook MIT License UpdatedMar 25, 2023 -
hw7-regression-cb Public
Forked from bmi203-2023/hw7-regressionImplement a logistic regression classifier using gradient descent.
Python MIT License UpdatedMar 13, 2023 -
hw6-hmm-viterbi-cb Public
Forked from bmi203-2023/hw6-hmm-viterbiImplementation of the Viterbi algorithm, a dynamic program that is a common decoder for Hidden Markov Models (HMMs).
Python UpdatedMar 1, 2023 -
hw5-nw-cb Public
Forked from bmi203-2023/HW5-NWProject 5: Needleman-Wunsch Global Alignment
Python UpdatedFeb 15, 2023 -
hw4-prim-mst_cb Public
Forked from bmi203-2023/hw4-prim-mstImplement Prim's algorithm to construct a minimum spanning tree.
Python MIT License UpdatedFeb 8, 2023 -
hw3-clustering_cb Public
Forked from bmi203-2023/hw3-clusteringJupyter Notebook MIT License UpdatedJan 31, 2023 -
HW2-BFS_CB Public
Forked from bmi203-2023/HW2-BFSHW2 BFS
Jupyter Notebook MIT License UpdatedJan 25, 2023 -
hw1_fast_aq-parse_cb Public
Forked from bmi203-2023/HW1-FAST-AQ-ParserBuilding a FAST[AQ] Parser + Building a DNA -> RNA Transcriber
Python MIT License UpdatedJan 18, 2023 -
workshops_UW_Seattle Public
Forked from hawn-lab/workshops_UW_SeattleHTML GNU General Public License v3.0 UpdatedJul 14, 2021 -
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Bioinformatics_using_Python Public
This repository is for all the different function commonly used for bioinformaticians to evaluate Genetic Data
Jupyter Notebook UpdatedFeb 6, 2021 -
Summer_Internship_2020 Public
In this study, we will analyze the gene expression differnt coronaviruses (CoVs) infections to determine how each virus differs when causing a disease. Here, we focuses the analysis on samples from…
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Cleaning_Manipulating_Data Public archive
In this repository is dedicated to small projects whose focus is on practicing cleaning, analyzing, and debugging large data.
Python UpdatedSep 9, 2020 -
biopython Public
Forked from biopython/biopythonOfficial git repository for Biopython (originally converted from CVS)
Python Other UpdatedApr 26, 2020 -
Material for the D-Lab's visualization workshop
Jupyter Notebook UpdatedApr 14, 2020 -
XenofilteR Public
Forked from NKI-GCF/XenofilteRFiltering of PDX samples for mouse derived reads
R GNU General Public License v3.0 UpdatedNov 18, 2019 -
bds-files Public
Forked from vsbuffalo/bds-filesSupplementary files for my book, "Bioinformatics Data Skills"
Python MIT License UpdatedOct 15, 2018
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