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SoLo algorithm for resolution enhancement of fluorescence images and super-resolution reconstruction of SMLM/FF images

1 Updated Apr 22, 2026

This repository contains the official source code for our paper, "Artifact-suppressed and adaptive self-inspired learning denoising for super-resolution fluorescence microscopy".

Python 3 Updated Apr 24, 2026

A curated list of resources for using LLMs to develop more competitive grant applications.

Python 4,125 510 Updated Mar 1, 2024

A universal fluorescence microscopic image restoration algorithm

IDL 5 1 Updated Jan 29, 2026

A toolkit designed to correct image distortion and drift, specifically for expansion microscopy (ExM)

MATLAB 1 Updated Mar 5, 2026

Data Set and Code For Fluorescence anisotropy structured illumination microscopy for quantitative super-resolution mapping of subcellular microenvironments and cytoskeletal dynamics

1 Updated Mar 6, 2026

Fast and generalizable blind-SIM reconstruction using an unrolled neural network

Python 5 Updated Dec 4, 2025

EPI-TIRF cross-modality Network enables background subtraction and axial super-resolution for widefield fluorescence microscopy

Python 2 Updated Jan 23, 2026

Fast and Accurate 3D PSF Computation for Fluorescence Microscopy

MATLAB 30 7 Updated Oct 28, 2025

A fluorescence microscopy image deconvolution algorithm based on kernel learned from data

Python 6 Updated Feb 8, 2026

STORM microscopy neural network for Z-value regression

Python 1 Updated Feb 9, 2026

🐹 Deep clean and optimize your Mac.

Shell 49,656 1,533 Updated Apr 29, 2026

A 3D MINFLUX processing and analysis software

Python 1 Updated Jan 19, 2026
Cuda 1 Updated May 26, 2025

Flow-Registration toolbox for 2P motion compensation

MATLAB 27 5 Updated Sep 16, 2025

CUDA-accelerated 3D BioImage Computing (ICCV BIC 2025)

Python 30 1 Updated Apr 3, 2026

Data augmentation and denoising for fluorescence microscopy with physics-based modeling

Jupyter Notebook 2 1 Updated Feb 10, 2026

browsing large volumetric data and shapes

Java 19 1 Updated Apr 10, 2026
MATLAB 3 2 Updated Jun 27, 2025

imagej plugin for kymographs with key framing and interpolation

Java 5 1 Updated Feb 13, 2022

Matlab code for tracking edge of cell and extracting dynamic kymographs

MATLAB 3 Updated Jun 25, 2020

Confocal image processing scripts written by Jim Rowe

Python 1 Updated Jan 24, 2021

Self-adaptive fine-tuning of deep learning super-resolution microscopy for artifact suppression in live-cell imaging

Python 15 1 Updated Aug 18, 2025

SSR-SIM: Bio-friendly and high-precision super-resolution imaging through self-supervised reconstruction structured illumination microscopy

Python 11 1 Updated Mar 19, 2026

Official PyTorch implementation of the "SN2N"

Python 9 1 Updated Jan 17, 2026

An integrated software suite for quality-controlled augmented quantitative structured illumination microscopy.

1 Updated Dec 5, 2025

Interactive imaging viewer for multi-channel time-series microscopy data

Python 1 Updated Aug 28, 2025
Python 6 4 Updated Dec 15, 2025

channel-linked multi-emitter fitter

1 Updated Jan 22, 2025

Point-Scanning Super-Resolution 2

Python 12 1 Updated Apr 16, 2026
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