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refineGEMs is a python package inteded to help with the curation of genome-scale metabolic models (GEMS).

Python 20 3 Updated May 19, 2026

An event-driven framework designed to build and orchestrate multi-agent AI systems. It enables seamless integration of AI agents with real-world data sources and systems, facilitating complex, mult…

Python 4,889 262 Updated Jun 12, 2026

Systems biology tools made available to LLM agents.

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Systems biology tools made available to LLM agents.

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Daytona is a Secure and Elastic Infrastructure for Running AI-Generated Code

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Libraries for the Systems Biology Graphical Notation (SBGN); Java and C++

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The open protein interaction platform repo

JavaScript 8 13 Updated Aug 6, 2024

JSBML is a community-driven project to create a free, open-source, pure Java™ library for reading, writing, and manipulating SBML files (the Systems Biology Markup Language) and data streams. It is…

Java 42 27 Updated May 30, 2026

The interactive graph sharing website.

Python 35 48 Updated Aug 6, 2023

cBioPortal for Cancer Genomics

Java 1,015 859 Updated Jun 12, 2026

Main documentation site for NRNB GSoC project ideas and resources

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ML training on SBOL data

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An AI-powered platform for discovering, analyzing, and exploring biomodels from the VCell database. Built as part of Google Summer of Code (GSoC25), this project combines modern web technologies wi…

TypeScript 12 13 Updated Apr 18, 2026

cy3sbml: SBML for Cytoscape 3

Java 15 4 Updated Jan 22, 2026

Automated Penetration Testing Framework - Open-Source Vulnerability Scanner - Vulnerability Management

Python 5,236 1,108 Updated Jun 12, 2026

All Algorithms implemented in Java

Java 65,833 21,204 Updated Jun 10, 2026

Hunt down social media accounts by username across social networks

Python 84,971 9,927 Updated Jun 13, 2026

微信开发 Java SDK ,支持包括微信支付,开放平台,小程序,企业微信,视频号,公众号等的后端开发

Java 32,865 9,067 Updated Jun 12, 2026

🎥 Command line media player

C 35,557 3,379 Updated Jun 12, 2026

My Python Examples

Python 35,088 12,922 Updated Jun 8, 2026

All Algorithms implemented in Python

Python 221,934 50,757 Updated Jun 1, 2026

TensorRT LLM provides users with an easy-to-use Python API to define Large Language Models (LLMs) and supports state-of-the-art optimizations to perform inference efficiently on NVIDIA GPUs. Tensor…

Python 13,865 2,463 Updated Jun 14, 2026