An abstract implementation of the registry design pattern proposed in (Hartog et. al., 2023). Provides a factory for registries that dynamically organize modular functionalities.

BIP😸 is an informational BIP that outlines a general guideline for encoding Bitcoin addresses as strings of emoji. It includes example code for working with emoji addresses.

A registry of publicly available datasets on AWS

Python package for Causal Discovery by learning the graphical structure of Bayesian networks. Structure Learning, Parameter Learning, Inferences, Sampling methods.

TargetDB is a tool to quickly querry multiple publicly available databases and provide an integrated view of the information available about potential targets

Python pipeline for the analysis of nanopore data from my MSci project. (Version 1 - detection and characterisation of biomarker events)

A comprehensive macromolecular library

Mol* as anywidget

Python Library for Causal and Probabilistic Modeling using Bayesian Networks

Fishers Exact Test for Python (Cython)

Proxy server to bypass Cloudflare protection

A shell script that prints out pretty git branch sync status reports

My GitHub profile README.md

DSPy: The framework for programming—not prompting—foundation models

Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtool…

Python wrapper -- and more -- for BEDTools (bioinformatics tools for "genome arithmetic")