-
University of Illinois / (former) Mayo Clinic
- IL, USA
-
19:02
(UTC -06:00) - https://nuchange.ca
- @beapen
- in/beapen
- https://orcid.org/0000-0003-3208-4977
Highlights
- Pro
-
crisp-t Public
CRISP-T: AI assisted Qualitative Research!
-
fhirformjs Public
NPM module to convert FHIR Questionnaire JSON to JSON Schema for form rendering.
-
medpromptjs Public
MedpromptJS: Base classes for easy GenAI app development and reference implementation of LLM-in-the-Loop CQL on unstructured data.
-
-
fhiry Public
FHIR to pandas dataframe for data analytics, AI and ML!
-
dhti Public
DHTI: a reference architecture for Gen AI in healthcare.
-
pyomop Public
Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries, MCP server and FHIR import.
-
-
-
cql-express-r4 Public
How to setup an Express server to execute CQL (Clinical Quality Language) with LLM support
-
openmrs-esm-dhti-template Public template
DHTI Conch template
-
gh-action-bump-version Public
Forked from phips28/gh-action-bump-versionGitHub Action for automated npm version bump.
JavaScript MIT License UpdatedNov 11, 2025 -
genomic-tokenizer Public
Genomic Tokenizer: Biology-driven Tokenizer for DNA sequences
-
phishing-mcp-server Public
Forked from rishikesh-sahay/phishing-mcp-serverMCP server for phishing URL detection
Python UpdatedOct 29, 2025 -
fhir-mcp-server Public
Forked from wso2/fhir-mcp-serverFHIR MCP Server – helping you expose any FHIR Server or API as a MCP Server.
Python Apache License 2.0 UpdatedOct 20, 2025 -
nlp-qrmine Public archive
Qualitative Research support tools in Python
-
cookiecutter-uv Public
Forked from fpgmaas/cookiecutter-uvA modern cookiecutter template for Python projects that use uv for dependency management
Python MIT License UpdatedSep 25, 2025 -
cds-hooks-sandbox Public
Forked from cds-hooks/sandboxCDS Hooks Sandbox
JavaScript Apache License 2.0 UpdatedSep 23, 2025 -
-
hephaestus Public archive
🌠 Hephaestus - ETL and ML tools for OHDSI - OMOP CDM
-
writing-tools-mcp Public
Forked from wdm0006/writing-tools-mcpA set of tools for writing things like blogs
-
paperaj Public
Collaboratively write journal papers in MS-Word and compile it to LaTeX!
-
kedro-tf-image Public
Kedro pipelines for preprocessing images for TensorFlow.
-
-
zotero-mcp Public
Forked from 54yyyu/zotero-mcpZotero MCP: Connects your Zotero research library with Claude and other AI assistants via the Model Context Protocol to discuss papers, get summaries, analyze citations, and more.
Python MIT License UpdatedAug 20, 2025 -
Broadsea-Atlasdb Public
Forked from OHDSI/Broadsea-AtlasdbA Postgresql database in a Docker container for OHDSI Atlas/WebAPI
Shell Apache License 2.0 UpdatedAug 18, 2025 -
-
-
cql-execution Public
Forked from cqframework/cql-executionA JavaScript framework for executing CQL with DocumentReference parsing hook for use with LLMs.
-
biofm-eval Public
Forked from m42-health/biofm-evalLibrary to extract embeddings for DNA sequences using BioFM genomics foundation model
Python Other UpdatedApr 11, 2025