Make colorful identity heatmaps of genomic sequence

fork of the GPU genome aligner

The complete sequence of a human genome

Framework for analyzing low depth NGS data in heterogeneous populations using PCA.

Long read / genome alignment software

Python library to identify Identical By State regions

Core Hunter 3: a flexible core subset selection tool

Ultrafast GPU-enabled QTL mapper

PPL (Pore-C PipLine) is a set of tools to process, evaluate and visualize the multi-way contacts experiment based on 3C and ONT long reads sequencing.

Exact optimization for cost function networks and additive graphical models

A curated list of awesome Bioinformatics libraries and software.

base-accurate DNA sequence alignments using WFA and mashmap3

A collection of color palettes inspired by plants and pop culture.

使深信服（Sangfor）开发的非自由的 VPN 软件 EasyConnect 和 aTrust 运行在 docker 或 podman 中，并作为网关和/或提供 socks5、http 代理服务

GraffiTE is a pipeline that finds polymorphic transposable elements in genome assemblies and/or long reads, and genotypes the discovered polymorphisms in read sets using genome-graphs.

The minimal amount of CSS to replicate the GitHub Markdown style

In-depth characterization and annotation of differences between two sets of DNA sequences

An R/Shiny platform for genome-wide SNP analysis and visualization with AI-assisted features

Foreign Contamination Screening caller scripts and documentation

This is the standalone version of the EviAnn pipeline

source code for EVM

PASA software

Few scripts facilitating the extraction of info from Repeat Masker .out files

The next version of bwa-mem

phasing and Allele Specific Expression from RNA-seq