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Chai-1, SOTA model for biomolecular structure prediction

Python 1,803 252 Updated Sep 5, 2025

A trainable PyTorch reproduction of AlphaFold 3.

Python 1,367 177 Updated Nov 5, 2025

A TUI for controlling and monitoring Framework Computers hardware built in Rust

Rust 173 9 Updated Nov 2, 2025
Python 35 13 Updated Sep 24, 2025

GPT (Generative Pre-trained Transformer) for de novo molecular design by enforcing specified targets

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Message Passing Neural Networks for Molecule Property Prediction

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Molecule Design using Monte Carlo Tree Search with Neural Rollout

Python 168 53 Updated Jan 25, 2019
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GitHub's official MCP Server

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Python interface for RCSB.org API services

Python 52 8 Updated Oct 10, 2025

dictionary of monomers and links

18 38 Updated Oct 8, 2025

Maartens Resource Compiler

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The Swiss Army knife for carbohydrate structure validation, refinement and analysis

C++ 28 10 Updated Oct 29, 2025

A suite of programs to manipulate and examine mmCIF files

C++ 4 1 Updated Sep 10, 2025
C++ 1 1 Updated Oct 1, 2025

Biomni: a general-purpose biomedical AI agent

Python 2,318 380 Updated Nov 6, 2025

C++ library for reading and writing XML and creating web, REST and SOAP servers

C++ 11 6 Updated Oct 22, 2025

Application to calculate ramachandran z-scores

C++ 1 Updated Oct 7, 2025

A simplified implementation of DSSP algorithm for PyTorch and NumPy

Python 95 14 Updated Jun 9, 2025

A TUI for translating text in multiple translators simultaneously as well as OpenAI and local LLM, with support for translation history and automatic language detection.

JavaScript 45 Updated Mar 31, 2025

Build orchestrator

Python 16 3 Updated Nov 6, 2025

A Julia package to analyze protein sequences, structures, and evolutionary information

Julia 83 16 Updated Nov 5, 2025

Molecular Processing Made Easy.

Python 515 55 Updated Jun 10, 2024

The Open-Source Server for Conda Packages

Python 318 81 Updated Nov 6, 2024

PSIPRED Protein Secondary Structure Predictor

Java 58 13 Updated Jul 3, 2025

C-library for calculating Solvent Accessible Surface Areas

C 162 39 Updated Jul 5, 2025

Wrapper to protein secondary structure calculation packages

Julia 13 1 Updated Apr 3, 2025

Voronota is a software tool for analyzing three-dimensional structures of biological macromolecules using the Voronoi diagram of atomic balls.

C++ 38 6 Updated Nov 6, 2025

nFPM is Not FPM - a simple deb, rpm, apk, ipk, and arch linux packager written in Go

Go 2,421 168 Updated Nov 3, 2025

Conda recipes for the bioconda channel.

Shell 1,762 3,638 Updated Nov 6, 2025
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