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Variational Autoencoder with Arbitrary Conditioning

Python 80 24 Updated Oct 3, 2023

Computer-assisted de novo design of natural product mimetics offers a viable strategy to reduce synthetic efforts and obtain natural-product-inspired bioactive small molecules but suffers from seve…

Python 4 1 Updated Oct 19, 2020

this repository accompanies the book "Grokking Deep Learning"

Jupyter Notebook 7,702 1,625 Updated Jun 1, 2024

Advanced Deep Learning with Keras, published by Packt

Python 1,998 1,025 Updated Mar 2, 2026

Code Repository for Machine Learning with PyTorch and Scikit-Learn

Jupyter Notebook 5,178 1,816 Updated Jan 2, 2026

Inside Deep Learning: The math, the algorithms, the models

Jupyter Notebook 283 99 Updated Sep 1, 2023

HandsOn-Unsupervised-Learning-with-Python, Published by Packt

Python 49 41 Updated Jan 15, 2021

Source Code for the Book Classic Computer Science Problems in Python

Python 1,124 411 Updated Mar 9, 2025

Bayesian Modeling and Probabilistic Programming in Python

Python 9,617 2,252 Updated May 13, 2026

Website for Computational Exome and Genome Analysis

Perl 21 8 Updated Jul 30, 2019

Control-FREEC: Copy number and genotype annotation in whole genome and whole exome sequencing data

C++ 2 Updated Aug 9, 2019
Java 2 Updated Oct 6, 2020

Best practice RNA-Seq analysis pipeline for reference-based RNA-Seq analysis

Shell 40 11 Updated May 17, 2021

marker-based purification of cell types from single-cell RNA-seq datasets

R 141 16 Updated Mar 13, 2026

Companion code repository for the "Genomics in the Azure Cloud" book

Jupyter Notebook 8 4 Updated Dec 12, 2022

A series of Python Jupyter notebooks that help you better understand "The Elements of Statistical Learning" book

Jupyter Notebook 918 281 Updated Jul 18, 2021

Copies of notebooks used in the practical sessions for Algorithms for DNA Sequencing

424 387 Updated Jan 21, 2023

Slides for Algorithms for DNA Sequencing Coursera class

364 236 Updated Sep 15, 2015

Python for Genomic Data Science 2015 Coursera from Johns Hopkins University

Python 18 34 Updated Aug 2, 2015

Code associated with the book Practical Gradient Boosting

Python 10 3 Updated Oct 18, 2022

Repository for GH public projects

Jupyter Notebook 19 12 Updated Feb 29, 2024

Code for Mastering Python for Bioinformatics (O'Reilly, 2021, ISBN 9781098100889)

Python 1 Updated Jul 14, 2021

Code for Tiny Python Projects (Manning, 2020, ISBN 1617297518). Learning Python through test-driven development of games and puzzles.

Python 1,799 2,646 Updated Jul 22, 2024

A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin

1 Updated Oct 4, 2021
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