Stars
Multi-agent collaboration engine — AI agents that work as one
A set of ready to use Agent Skills for research, science, engineering, analysis, finance and writing.
🔬 MCP server for AI-powered napari control. Connect Claude, ChatGPT, Cursor, and other LLMs to napari for interactive image analysis. Perfect for automating microscopy workflows and building intell…
Morphological snakes for image segmentation and tracking
Official codebase for DMT-JEPA (Discriminative Masked Targets for Joint-Embedding Predictive Architecture)
Your own personal AI assistant. Any OS. Any Platform. The lobster way. 🦞
a transformer-based framework for dense 3D cellular segmentation
My personal guide to the great Python library Open3D.
Native Qt interface for Meta's Segment Anything 2 in Images and Videos
A wrapper around the sleepwalk package that allows for interactive knn visualizations of an embedding.
Python interactive dashboards for learning data science
Code for the paper "Spatio-temporal Self-Supervised Representation Learning for 3D Point Clouds" (ICCV 2021)
Segment Anything for Microscopy
Generate consensus 3D cells segmentations by combining 2D cell segmentations from any combination of xy, xz, yz views, compatible with outputs of any 2D segmentation method.
A collection of useful python utilities from True North Intelligent Algorithms
[NeurIPS 2023] PointGPT: Auto-regressively Generative Pre-training from Point Clouds
A napari plugin for clustering objects according to their properties.
Non-parametric density inference for single-cell analysis.
A package to help convert different single-cell data formats to each other
Generate HCR-style Probe Pairs for mRNA visualization
The 2025 version of cellPLATO
Curated list of project-based tutorials