Arnold Schwarzenegger based programming language

Fact Graph

An open-source toolkit for large-scale genomic analysis

S3HyperSync is a high-performance, memory-efficient, and cost-effective tool for synchronizing files between S3-compatible storage services.

A scala based DSL and framework for writing and executing bioinformatics pipelines as Directed Acyclic GRaphs

Distributed execution of bioinformatics tools on Apache Spark. Apache 2 licensed.

WDL tools for parsing, type-checking, and more

Artisanal 🤣 bioinformatics tools and pipelines in Scala

Tools to gather evidence for structural variation via breakpoint detection.

Collection of assorted tools for processing, filtering, annotating, organizing, merging, comparing, and reformatting variant data.