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43 results for source starred repositories written in Shell
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Node Version Manager - POSIX-compliant bash script to manage multiple active node.js versions

Shell 88,918 9,523 Updated Sep 6, 2025

Quickly create and run optimised Windows, macOS and Linux virtual machines

Shell 12,785 574 Updated Nov 1, 2025

Persists tmux environment across system restarts.

Shell 12,205 468 Updated Aug 13, 2024

Combination of multiple linters to run as a GitHub Action or standalone

Shell 10,158 1,025 Updated Nov 6, 2025

Run Windows apps such as Microsoft Office/Adobe in Linux (Ubuntu/Fedora) and GNOME/KDE as if they were a part of the native OS, including Nautilus integration.

Shell 10,033 442 Updated Aug 18, 2024

Time Machine style backup with rsync.

Shell 3,528 472 Updated May 27, 2025

Type in Morse code by repeatedly slamming your laptop shut

Shell 2,410 24 Updated Apr 28, 2020

Awesome tmux-based terminal divider

Shell 2,048 66 Updated Feb 22, 2025

Unix, R and python tools for genomics and data science

Shell 1,330 362 Updated Aug 25, 2025

Power efficient dashboard for Kindle 4 NT devices

Shell 1,294 40 Updated Mar 4, 2024

💾 Create minimalist, Ubuntu based images for the Nvidia jetson boards

Shell 494 138 Updated Aug 3, 2025

Command-line tool and bash library that creates JSON

Shell 457 8 Updated Dec 8, 2024

k-mer based assembly evaluation

Shell 332 21 Updated Jun 28, 2024

A user-friendly workflow for phylogenomics

Shell 221 25 Updated Oct 25, 2025

VGP repository for the genome assembly working group

Shell 193 54 Updated May 21, 2025

`timep` is an efficient and accurate state-of-the-art trap-based profiler and flamegraph generator for bash code. `timep` does much more than "providing per-command execution times" -- it maps the …

Shell 181 4 Updated Nov 6, 2025

Query CSVs using SQL

Shell 166 5 Updated Sep 22, 2019

Bash script to download/update snapshots of files from NCBI genomes repository (refseq/genbank) with track of changes and without redundancy

Shell 161 15 Updated Dec 15, 2024

A simple script to help programmers who want to work within Docker

Shell 153 21 Updated Nov 4, 2025
Shell 79 18 Updated Jun 12, 2020

The buttery eel - a slow5 guppy/dorado basecaller wrapper

Shell 41 2 Updated Aug 6, 2025

the pangenome graph evaluator

Shell 29 2 Updated Apr 12, 2021

Stupid Simple (ba)Sh Testing - A functional software testing framwork

Shell 23 3 Updated Nov 8, 2023

exploring viral genome assembly with variation graph tools

Shell 20 4 Updated May 18, 2020

connect to a cisco anyconnect server with 2FA via web SSO on a headless server

Shell 20 1 Updated Apr 13, 2021

Miscellaneous "recipes" for the Conda packaging system.

Shell 17 10 Updated Apr 29, 2025

Recommended Graphtyper pipelines

Shell 15 4 Updated Feb 22, 2021
Shell 9 5 Updated Jul 12, 2020

A small set of test cases for long-read assembly tools

Shell 7 1 Updated Jul 25, 2019
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