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Central repository for biomolecular foundation models with shared trainers and pipeline components

Python 760 134 Updated Apr 5, 2026

A fully open source biomolecular structure prediction model based on AlphaFold3 with Apple Silicon support

Python 23 2 Updated Nov 22, 2025

MMseqs2: ultra fast and sensitive search and clustering suite

C 2,013 279 Updated Apr 4, 2026

Open-source foundation of the user-sponsored PyMOL molecular visualization system.

C 1,636 370 Updated Mar 25, 2026

Your own personal AI assistant. Any OS. Any Platform. The lobster way. 🦞

TypeScript 348,377 69,673 Updated Apr 5, 2026
Python 9 7 Updated Jan 28, 2026

A fully open source biomolecular structure prediction model based on AlphaFold3

Python 662 94 Updated Apr 4, 2026

Documentation for the Mol* Viewer

49 14 Updated Dec 21, 2023

LLM Council works together to answer your hardest questions

Python 16,617 3,300 Updated Nov 22, 2025

Code for the ProteinMPNN paper

Jupyter Notebook 1,687 453 Updated Aug 14, 2024

Fast and memory-efficient exact attention

Python 23,143 2,583 Updated Apr 4, 2026

Pretrain, finetune ANY AI model of ANY size on 1 or 10,000+ GPUs with zero code changes.

Python 30,989 3,699 Updated Apr 4, 2026

Tensors and Dynamic neural networks in Python with strong GPU acceleration

Python 98,804 27,403 Updated Apr 5, 2026

An open source implementation of CLIP.

Python 13,640 1,269 Updated Mar 12, 2026

Repository for the BoltzGen model

Jupyter Notebook 884 214 Updated Mar 6, 2026

PyTorch code and models for VJEPA2 self-supervised learning from video.

Python 3,552 416 Updated Mar 23, 2026

A high-performance, GPU-accelerated library for key computational chemistry tasks, such as molecular similarity, conformer generation, and geometry relaxation.

Cuda 242 22 Updated Apr 2, 2026

System Level Intelligent Router for Mixture-of-Models at Cloud, Data Center and Edge

Go 3,613 596 Updated Apr 5, 2026
Python 958 83 Updated Feb 24, 2026

A partially latent flow matching model for the joint generation of a protein’s amino acid sequence and full atomistic structure, including both the backbone and side chain.

Python 287 34 Updated Sep 23, 2025

Inference code for RFdiffusion2

Python 409 62 Updated Apr 3, 2026

Enjoy the magic of Diffusion models!

Python 12,170 1,183 Updated Apr 2, 2026

ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit and hundreds of Google TPUs using Transformers Models.

Jupyter Notebook 1,296 167 Updated May 22, 2025

AI-powered ab initio biomolecular dynamics simulation

Python 571 82 Updated Feb 18, 2025

This API provides programmatic access to the AlphaGenome model developed by Google DeepMind.

Python 1,835 256 Updated Mar 18, 2026

Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)

Python 1,061 58 Updated Oct 3, 2025

Transformer-based sequence correction method for genome assembly polishing

Jupyter Notebook 100 8 Updated Mar 11, 2025

[ICLR 2025 Oral] Block Diffusion: Interpolating Between Autoregressive and Diffusion Language Models

Python 988 70 Updated Jul 10, 2025

Open-source implementation of AlphaEvolve

Python 5,855 934 Updated Mar 18, 2026
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