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Starred repositories

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Python 325 24 Updated Apr 10, 2026

AlphaGenome PyTorch port

Python 112 28 Updated Apr 18, 2026
Jupyter Notebook 63 18 Updated Dec 9, 2025

Python Backtesting library for trading strategies

Python 21,190 5,040 Updated Aug 19, 2024

Scalable framework for integrating single-cell omics with genetic data using AnnData.

Python 14 4 Updated Apr 14, 2026

The project of the downstream tasks based on LucaOne's Embedding.

Python 75 8 Updated Apr 15, 2026

Production-grade Rust-native trading engine with deterministic event-driven architecture

Rust 22,097 2,679 Updated Apr 19, 2026

Learning Deep Representations of Data Distributions

TeX 948 94 Updated Apr 17, 2026
Python 251 38 Updated Apr 15, 2026
HTML 18 1 Updated Mar 31, 2026

Analysis of epigenetic data in Python

Jupyter Notebook 7 1 Updated Oct 31, 2025

Biomni: a general-purpose biomedical AI agent

Python 2,976 546 Updated Apr 13, 2026

Flexible and powerful tensor operations for readable and reliable code (for pytorch, jax, TF and others)

Python 9,457 396 Updated Apr 19, 2026

assistant tools for attention visualization in deep learning

Jupyter Notebook 1,266 94 Updated Jun 9, 2022

The goal of this library is to generate more helpful exception messages for matrix algebra expressions for numpy, pytorch, jax, tensorflow, keras, fastai.

Jupyter Notebook 811 39 Updated Apr 7, 2022

The AI developer platform. Use Weights & Biases to train and fine-tune models, and manage models from experimentation to production.

Python 11,009 861 Updated Apr 18, 2026

PyTorch building blocks for the OLMo ecosystem

Python 1,159 228 Updated Apr 18, 2026

Modeling, training, eval, and inference code for OLMo

Python 6,482 751 Updated Nov 24, 2025

This API provides programmatic access to the AlphaGenome model developed by Google DeepMind.

Python 1,872 258 Updated Mar 18, 2026

📚 从零开始构建大模型

Jupyter Notebook 29,085 2,701 Updated Mar 16, 2026

pytorch dataloaders for single-cell perturbation data

Python 44 26 Updated Mar 8, 2026

Comprehensive suite for evaluating perturbation prediction models

Python 125 45 Updated Mar 24, 2026

State is a machine learning model that predicts cellular perturbation response across diverse contexts

Python 562 153 Updated Apr 9, 2026

Convolutions for Sequence Modeling

Assembly 910 70 Updated Jun 13, 2024

Pytorch implementation of the Borzoi model from Calico, and Flashzoi, a 3x faster Borzoi enhancement.

Python 95 23 Updated Nov 13, 2025

Accelerate Molecular Biology Research with Machine Learning

Python 50 8 Updated Mar 29, 2026

Unified Efficient Fine-Tuning of 100+ LLMs & VLMs (ACL 2024)

Python 70,303 8,603 Updated Apr 12, 2026

GPU Kernels

Cuda 223 22 Updated Apr 27, 2025

Development repository for the Triton language and compiler

MLIR 18,987 2,781 Updated Apr 18, 2026

Implementation of Rotary Embeddings, from the Roformer paper, in Pytorch

Python 806 66 Updated Jan 30, 2026
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