Toolbox for biostatistics and clinical data analysis in R. Developed by the biostatistics team at Laboratorios Sophia S.A. de C.V.

Build reliable Gen AI solutions without overhead 🍕

A ggplot interface for creating clincial trial swimlanes

📊 Circular and Rectangular Manhattan Plot

Analyzing and visualizing KEGG information using the grammar of graphics

Estimated Marginal Means and Marginal Effects from Regression Models for ggplot2

Ontology for Precision Oncology Workflows at the National Center of Tumor Diseases Heidelberg

The package wrapping the book, for deployment via the Bioconductor build system.

R package to use EaSIeR to predict anti-tumor immune response from bulk RNA-seq

Package to wrangle and visualize genomic data in R

DrWhy is the collection of tools for eXplainable AI (XAI). It's based on shared principles and simple grammar for exploration, explanation and visualisation of predictive models.

An R-Package to estimate and plot confounder-adjusted survival curves (single event survival data) and confounder-adjusted cumulative incidence functions (data with competing risks) using various m…

An R-Package to Visualize the (Causal) Effect of a Continuous Variable on a Time-To-Event Outcome

Easily generate information-rich, publication-quality tables from R

Mutational signature analysis for low statistics SNV data

An R package for predicting HR deficiency from mutation contexts

This method uses shallow Whole Genome Sequencing (sWGS) and the segmentation of a genomic profile to assess the Homologous Recombination Deficiency of a tumor based on the number of Large-scale Gen…

A tool to calculate Hazard Ratios in Cox models with interaction terms and splined interaction terms

🐦 R client for interacting with Twitter's [stream and REST] APIs

Take command of your set enrichment analyses.

RISmed is an R package for downloading and analyzing data from the NCBI databases

Homologous recombination deficiency in TCGA PanCancer Atlas

A collection of resources for learning about tools and programming languages related to Bioinformatics

🛠️ 🌐 Thematic list of high-quality data science resources

A repository for the lessons and notebooks used for R tutorials.