Prediction of Cas9-induced DSB repair using thermodynamic features

CRISPR/Cas9 off-target prediction using physically inspired features

Data science side projects

Quant finance side projects: calculation of volatility surfaces from option chain data, LSTM time series prediction

Sales prediction on real-world data using XGBoost and lightgbm. Sample digital consultancy project

Web scraping using BeautifulSoup

PHP online database for gene editing off-target studies

derivative-free NN optimiser using MCMC algorithms

reverse-engineer a heatmap image

Data Science investigations on the Black Friday dataset using Extreme Gradient Boosting

calculate the topological dimension of protein interaction networks (active CI)

Inferring infection bottleneck sizes from viral transmission data

ODE solvers simulating the loading of atoms into a combined magnetic and optical dipole trap

simulate efficient spatial translation of dipole-trapped atom clouds using counterdiabatic driving protocols

reinforcement learning on the Connect 4 game, involving computer vision

computer vision implementation for board state detection in the game Connect4