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@jsstevenson jsstevenson commented Jun 27, 2025

Original message is a little ambiguous -- edited for clarity

eg

"Reference mismatch at GRCh38:7 position 140753335-140753336 (input gave 'G' but correct ref is 'C')

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Everything's passing with the exception of #560

@jsstevenson jsstevenson marked this pull request as ready for review June 27, 2025 13:13
@jsstevenson jsstevenson requested review from a team as code owners June 27, 2025 13:13
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I think the original was correct, but maybe we could just revise the warning message?

Like "Input expression expected {ref} but the actual sequence on this position is {expected_ref}"?

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Yes, this PR is just modifying the message - it wasn't throwing an error incorrectly, the description of the error was backwards

@jsstevenson jsstevenson requested a review from korikuzma July 7, 2025 18:04
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I like this!

@jsstevenson jsstevenson merged commit 9cbb4b6 into main Jul 7, 2025
14 of 16 checks passed
@jsstevenson jsstevenson deleted the fix-validate-ref branch July 7, 2025 19:17
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3 participants