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Mbin: a federated content aggregator, voting, discussion and microblogging platform

PHP 404 30 Updated May 15, 2026

Statistical assessment and simulated evolution of gene regulatory networks

R 4 3 Updated May 23, 2024

Splicing Diversity Analysis for Transcriptome Data

R 4 4 Updated Apr 28, 2026

Estimation of Promoter Activity from RNA-Seq data

R 58 16 Updated Jul 14, 2025

A fully automated gene annotator from RNA-Seq expression data

Python 62 15 Updated Jul 1, 2023

Real numbers, data science and chaos: How to fit any dataset with a single parameter

Jupyter Notebook 650 58 Updated Nov 22, 2022

Chaotic attractors with python (Lorenz, Rossler, Rikitake etc.)

Python 99 23 Updated Apr 13, 2026

Chaospy - Toolbox for performing uncertainty quantification.

Python 470 89 Updated Sep 4, 2025

Principles of Chaos Engineering

437 119 Updated Dec 28, 2025

The ERGA Assembly Reports repository 👂

Python 16 40 Updated May 13, 2026

Pipelines for the production of Treeval data

Nextflow 31 7 Updated May 13, 2026

A shared database of rules for Total Perspective Vortex used by the usegalaxy.* federation.

11 19 Updated Apr 24, 2026
C++ 9 1 Updated Oct 30, 2025

Simultaneous multi-sample transcript assembler for RNA-seq data

C 17 6 Updated Dec 13, 2024

Annotating principal splice isoforms

Perl 18 6 Updated Nov 20, 2025

Generates https://view.commonwl.org/ like workflows images, showing a complete workflow.

Python 3 3 Updated Aug 6, 2024

The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.

R 21 6 Updated May 4, 2026

Evolutionary Transcriptomics with R

R 48 20 Updated Feb 6, 2026

Aggregate results from bioinformatics analyses across many samples into a single report.

JavaScript 1,450 665 Updated May 14, 2026

Like "toot together" but with more features like automatic thread splitting

Python 2 Updated Jan 27, 2023

Official repo for the standalone package of Coding Potential Calculator (CPC) 2.

Python 30 12 Updated Sep 11, 2021
1 1 Updated Jan 27, 2021

Entropic Profiler - detection of conservation in genomes using information theory

C 1 2 Updated Mar 7, 2017

Information Theory and Distance Quantification with R

R 152 22 Updated Dec 14, 2025
Python 2 2 Updated Jul 4, 2021

MECAT: an ultra-fast mapping, error correction and de novo assembly tool for single-molecule sequencing reads

C++ 111 26 Updated Oct 2, 2020

Nanopore data assembler

C 168 24 Updated Mar 27, 2022

Package for fetching metadata and downloading data from SRA/ENA/GEO

Python 358 66 Updated Dec 9, 2025
Ruby 3 Updated Apr 15, 2024
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