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7 stars written in Jupyter Notebook
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Self-supervised learning of molecular representations from millions of tandem mass spectra using DreaMS (Nat Biotechnology)

Jupyter Notebook 155 39 Updated Jan 30, 2026

Predicting tandem mass spectra from molecules

Jupyter Notebook 130 26 Updated Jan 15, 2026

MassSpecGym: A benchmark for the discovery and identification of molecules (NeurIPS 2024 Spotlight)

Jupyter Notebook 112 15 Updated Nov 13, 2025
Jupyter Notebook 62 8 Updated Sep 13, 2024

Code used to analyse and compare different molecular fingerprints.

Jupyter Notebook 3 Updated Jan 21, 2026

Multi-branch Neural Networks for Drug-Target Interaction Prediction and Target-conditioned de novo Drug Design

Jupyter Notebook 2 Updated Jan 9, 2026
Jupyter Notebook 1 Updated Oct 9, 2023