This repository contains data indexes from NIST's Genome in a Bottle project.

Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.

COVID-19 Italia - Monitoraggio situazione

Bayesian haplotype-based mutation calling

A versatile pairwise aligner for genomic and spliced nucleotide sequences

HaploGrep - mtDNA haplogroup classification. Supporting rCRS and RSRS.

fast and accurate alignment of BS-Seq reads using bwa-mem and a 3-letter genome

The mitochondrial workbench

mtDNA Variant Caller

📖🔬☕ BioJava is an open-source project dedicated to providing a Java library for processing biological data.