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An interactive web-based UI app for REINVENT that enables users to generate input files for running REINVENT calculations.

Python 19 9 Updated Jun 12, 2025

A tool for retrosynthetic planning

Python 810 173 Updated Mar 11, 2026

A graph-based workflow manager for computational chemistry pipelines

Python 71 7 Updated Feb 18, 2026

Module containing scripts to perform multiple comparison simultaneously and getting the exact same value as the average pairwise comparisons of molecules represented by binary fingerprints or real …

Python 60 15 Updated Nov 12, 2025

Interactive molecule viewer for 2D structures

Python 253 33 Updated Dec 27, 2025

Alchemical mutation scoring map

Python 41 17 Updated Apr 7, 2022

Effective Python: Third Edition — Source Code and Errata for the Book

Python 2,432 750 Updated Dec 10, 2024

Python interface of cpptraj

Jupyter Notebook 190 38 Updated Mar 6, 2026

Biomolecular simulation trajectory/data analysis.

C++ 164 69 Updated Apr 1, 2026

Parameter/topology editor and molecular simulator

Python 451 169 Updated Jan 12, 2026

Python API for cpptraj: a data analysis package for biomolecular simulation

Jupyter Notebook 1 Updated Mar 10, 2026

Biomolecular simulation trajectory/data analysis.

C++ 1 1 Updated Apr 1, 2026

An open tool implementing some recommended practices for analyzing alchemical free energy calculations

Python 136 62 Updated May 24, 2024
Python 1 Updated Jan 1, 2015