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An extension for Cytoscape.js that automatically updates node positions based on specified rules

JavaScript 37 8 Updated Jan 24, 2026

Apply basic transformations to graph elements

JavaScript 1 Updated Jan 20, 2026

SBGNFlow — an open-source pipeline to generate, merge/split, and visualize SBGN maps.

JavaScript 1 Updated Mar 24, 2026

Python library for SBGN

JavaScript 11 Updated Mar 26, 2026

Killer Sudoku Solver with DLX

Java 3 Updated Dec 31, 2025

Microservice Dependency Graph Dataset

48 7 Updated Feb 26, 2021

Hybrid Spring Embedder

TypeScript 2 Updated Dec 16, 2024

SAA: A tool to visually analyze varying software artifacts including source code files, pull requests, issues, and commits, as well as their links and their relationships with developers in a softw…

TypeScript 1 2 Updated Dec 14, 2025

PanGenoGrapher (PG2): A tool for visual analysis of Pan Genomes using graphs

TypeScript 5 Updated Dec 15, 2025

Convert hand-drawn SBGN maps to digital format.

JavaScript 4 7 Updated Mar 24, 2026

A curated list of awesome data labeling tools

4,298 474 Updated Jun 17, 2024

WikiPathways Database

Shell 12 21 Updated Mar 29, 2026

SketchLay: User-Guided Force-Directed Graph Layout through Freehand Sketching

JavaScript 8 1 Updated Dec 17, 2025

High-performance JavaScript polyline simplification library

JavaScript 2,388 209 Updated Nov 14, 2022

A new algorithm for retrieving topological skeleton as a set of polylines from binary images

C 582 64 Updated Jul 21, 2022

A Cytoscape.js extension to export the current graph view as an SVG.

JavaScript 42 6 Updated Mar 16, 2024

[CVPR 2024 Oral] InternVL Family: A Pioneering Open-Source Alternative to GPT-4o. 接近GPT-4o表现的开源多模态对话模型

Python 9,931 767 Updated Sep 22, 2025

Example of Canny edge detection algorithm in javascript

TypeScript 61 12 Updated Feb 4, 2020

A simple text to entity-relation graph generator, powered by gpt3

Vue 68 7 Updated Nov 30, 2023

Graph visualization and exploration software. Leverages cytoscape.js and provides rich and customized graph visualizations. Aims ultimate complexity management, customization, and user-friendliness.

TypeScript 16 2 Updated Feb 11, 2023

Deploying a React App (created using create-react-app) to GitHub Pages

TypeScript 6,964 970 Updated Dec 10, 2024

A collection of AWESOME things about Graph-Related LLMs.

2,416 162 Updated Nov 5, 2025

SyBValS: Systems Biology Validation Service

JavaScript 3 Updated Mar 25, 2026

Experimental renderer.

C++ 5 Updated May 19, 2024

A Cytoscape.js extension to provide a unified complexity management framework for compound graphs

JavaScript 12 1 Updated Nov 5, 2025

Official code repository of "HyperDiffusion: Generating Implicit Neural Fields with Weight-Space Diffusion" @ ICCV 2023

Python 200 20 Updated Jun 16, 2024

R package for microbiome data visualization and statistics. Uses phyloseq, vegan and the tidyverse. Docker image available.

R 125 13 Updated Mar 30, 2026

React-based web application that enables users to visualize both property graph and RDF data and explore connections between data without having to write graph queries.

TypeScript 447 79 Updated Mar 29, 2026
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