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daisy Public
Forked from mplsartindustry/daisyC++ GNU General Public License v3.0 UpdatedDec 19, 2025 -
data-package-tools Public
Data package software bill of materials (SBOM) tools
Java Apache License 2.0 UpdatedDec 13, 2025 -
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duckdb-parquet-tools Public
Apache Parquet format tools for DuckDB.
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dishevelled-bio Public
dishevelled.org bio
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nf-core-proteinannotator Public
Forked from nf-core/proteinannotatorThe best protein annotation pipeline in the world. Protein fasta → ??? → Annotations
Nextflow MIT License UpdatedDec 8, 2025 -
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biojava-legacy Public
Forked from biojava/biojava-legacyLegacy BioJava 1 Code
Java UpdatedNov 10, 2025 -
lick Public
LiCK, Library for ChucK
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nf-core-viralrecon Public
Forked from nf-core/viralreconAssembly and intrahost/low-frequency variant calling for viral samples
Nextflow MIT License UpdatedNov 7, 2025 -
velocity-cli Public
Command line interface to Apache Velocity. Apache 2 licensed.
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nf-core-sarek Public
Forked from nf-core/sarekAnalysis pipeline to detect germline or somatic variants from WGS / targeted sequencing
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nf-core-modules Public
Forked from nf-core/modulesRepository to host tool-specific module files for the Nextflow DSL2 community!
Nextflow MIT License UpdatedNov 6, 2025 -
homebrew-parquet-tools Public
Homebrew formulae for Parquet related tools.
Ruby BSD 2-Clause "Simplified" License UpdatedOct 13, 2025 -
chuck Public
Forked from ccrma/chuckChucK Music Programming Language
C++ GNU General Public License v2.0 UpdatedSep 18, 2025 -
display Public
Forked from mplsartindustry/displayLED matrix display
C++ GNU General Public License v3.0 UpdatedSep 9, 2025 -
nf-core-pangenome Public
Forked from nf-core/pangenomeRenders a collection of sequences into a pangenome graph.
Nextflow MIT License UpdatedAug 19, 2025 -
biojava Public
Forked from biojava/biojavaBioJava is an open-source project dedicated to providing a Java framework for processing biological data.
Java GNU Lesser General Public License v2.1 UpdatedJul 31, 2025 -
controller-128 Public
Forked from mplsartindustry/controller-128 -
bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell MIT License UpdatedApr 11, 2025 -
dishevelled-bio-nextflow Public
dsh-bio workflow processes implemented via Nextflow DSL1. Apache 2 licensed.
Nextflow Apache License 2.0 UpdatedMar 18, 2025 -
homebrew-bio Public
Forked from brewsci/homebrew-bio🍺🔬 Bioinformatics formulae for the Homebrew and Linuxbrew package managers
Ruby Other UpdatedMar 14, 2025 -
hook Public
The longshoreman's hook was historically used by longshoremen (stevedores).
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nf-core-kmerseek Public
Forked from seanome/nf-core-kmerseekNextflow MIT License UpdatedMar 7, 2025 -
kmerseek Public
Forked from seanome/kmerseekEfficient protein domain annotation search with reduced amino acid k-mers
Python MIT License UpdatedMar 5, 2025 -
cannoli Public
Forked from bigdatagenomics/cannoliDistributed execution of bioinformatics tools on Apache Spark. Apache 2 licensed.
Scala Apache License 2.0 UpdatedMar 2, 2025 -
bdg-formats Public
Forked from bigdatagenomics/bdg-formatsOpen source formats for scalable genomic processing systems using Avro. Apache 2 licensed.
Shell Apache License 2.0 UpdatedMar 2, 2025
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