A python package for Multiomics and Ecological Spatial Analysis (MESA)

BANKSY: Spatial Clustering Algorithm that Unifies Cell-Typing and Tissue Domain Segmentation. Python package for spatial transcriptomics analysis.

Pokemon themed colour schemes for R.

Pipeline to run scE2G

This repository is an exploratory resource to accelerate opensource analysis of CosMx® Spatial Molecular Imager (SMI) data. Contained here are and writeups and vignettes addressing a variety of top…

A game theoretic approach to explain the output of any machine learning model.

Fast algorithms for fitting topic models and non-negative matrix factorizations to count data.

A brazen two-column theme for Jekyll.

HMM for local ancestry inference. Class project UCSD CSE284 Personal Genomics, Spring 2021

FA2020 Bootcamp course website for the incoming cohort of the Bioinformatics & Systems Biology Ph.D. program