R toolkit for single cell genomics

Import public NYC taxi and for-hire vehicle (Uber, Lyft) trip data into a PostgreSQL or ClickHouse database

Comprehensive list of color palettes available in R ❤️🧡💛💚💙💜

R package that helps create and export ggplot2 charts in the style used by the BBC News data team

simple tools for data cleaning in R

Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file form…

Mastering Shiny: a book

'ggplot2' Based Publication Ready Plots

Data quality assessment and metadata reporting for data frames and database tables

Write reusable, composable and modular R code

🎄Visualization and annotation of phylogenetic trees

An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..

Join tables together on inexact matching

Tools for making beautiful & useful command line interfaces

Inferring CNV from Single-Cell RNA-Seq

Fast, sensitive and accurate integration of single-cell data with Harmony

Easily add significance brackets to your ggplots

Easily send great-looking HTML email messages from R

A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter) and mouse deconvolution methods

Palettes for R based on the Scientific Colour-Maps

A package to help convert different single-cell data formats to each other

📈 📊 Introduces geom_pointdensity(): A Cross Between a Scatter Plot and a 2D Density Plot.

ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)

View and Browse Code Using Flow Diagrams

R package implementation of Milo for testing for differential abundance in KNN graphs

Combination matrix axis for 'ggplot2' to create 'UpSet' plots

Integrative Composable Visualization Framework for ggplot2

An R package implementing the UMAP dimensionality reduction method.

🖍️ R package for colored terminal output — now superseded by cli

Functions for identifying and characterizing continuous developmental trajectories in single-cell data.