Stars
Production inference for encoder models - ColBERT, GLiNER, ColPali, embeddings etc. - as vLLM plugins for online and in-process deployment
Fine-tune Gemma 4 and 3n with audio, images and text on Apple Silicon, using PyTorch and Metal Performance Shaders.
Python CLI tool for converting JATS (Journal Article Tag Suite) XML files to Markdown.
🦖 ClawBio — The first bioinformatics-native AI agent skill library. Local-first. Reproducible. Built on OpenClaw.
BioDSA: Framework for Vibe Prototyping of AI Agents for Biomedicine
⚒ Evolutionary self-improvement for Hermes Agent — optimize skills, prompts, and code using DSPy + GEPA
a set of SKILLS.md for doing bioinformatics with agents like claude code
Fast, accurate & comprehensive text measurement & layout
SQLite VFS with sub-100ms cold JOIN queries from S3 + page-level compression and encryption
Mount Hugging Face Buckets and repos as local filesystems. No download, no copy, no waiting.
An AI co-scientist powered by Claude Scientific Skills running on your desktop.
Self-hosted, semantically-connected personal knowledge base
A high-performance HGVS variant nomenclature parser and normalizer written in Rust
The fastest BM25 scoring engine: 2,300x faster than BM25S. 28K QPS on 8.8M docs. 5 BM25 variants (Robertson, Lucene, ATIRE, BM25L, BM25+). Memory-mapped persistence, BMW pruning, streaming indexing…
Desktop Extensions: One-click local MCP server installation in desktop apps
remoteIGV: smoother IGV experience to view remote bams/crams
A text extraction and manipulation toolset for NISO-JATS coded XML files
Autonomous experiment loop extension for pi
Marketing skills for Claude Code and AI agents. CRO, copywriting, SEO, analytics, and growth engineering.
Build custom ACP-compatible AI agents using your existing subscriptions. No API keys. No vendor lock-in. Supports Claude, Gemini, and Codex backends.
Python SDK for ACP clients and agents.
Conversational & memory-enabled AI research partner for multi-omics analysis. From biological idea to full research paper.
An AI assistant that lives in your browser. Built for collaboration, not autonomy theater. You guide, it executes. Automate repetitive web tasks, extract data from any website, and transform it int…
Multi-agent communication extension for pi coding agent
Multi-subscription extension for pi -- use multiple OAuth accounts per provider (Anthropic, Codex, Copilot, Gemini, Antigravity)
Google Workspace CLI — one command-line tool for Drive, Gmail, Calendar, Sheets, Docs, Chat, Admin, and more. Dynamically built from Google Discovery Service. Includes AI agent skills.