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bioSkills Public
Forked from GPTomics/bioSkillsa set of SKILLS.md for doing bioinformatics with agents like claude code
Python MIT License UpdatedJan 20, 2026 -
clinical-trial-dashboard-shiny Public
Forked from asansal/clinical-trial-dashboard-shinyR UpdatedJan 20, 2026 -
data-engineering-zoomcamp Public
Forked from DataTalksClub/data-engineering-zoomcampData Engineering Zoomcamp is a free 9-week course on building production-ready data pipelines. The next cohort starts in January 2026. Join the course here 👇🏼
Jupyter Notebook UpdatedJan 15, 2026 -
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Biomni Public
Forked from snap-stanford/BiomniBiomni: a general-purpose biomedical AI agent
Python Apache License 2.0 UpdatedDec 8, 2025 -
rnaseq Public
Forked from nf-core/rnaseqRNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Nextflow MIT License UpdatedDec 5, 2025 -
rnavar Public
Forked from nf-core/rnavargatk4 RNA variant calling pipeline
Nextflow MIT License UpdatedDec 5, 2025 -
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chipseq Public
Forked from nf-core/chipseqChIP-seq peak-calling, QC and differential analysis pipeline.
Nextflow MIT License UpdatedNov 21, 2025 -
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awesome-pipeline Public
Forked from pditommaso/awesome-pipelineA curated list of awesome pipeline toolkits inspired by Awesome Sysadmin
UpdatedOct 24, 2025 -
UKB-RAP-Notebooks-Access Public
Forked from UK-Biobank/UKB-RAP-Notebooks-AccessUKB RAP Notebooks contains a collection of examples of how to use UK Biobank Research Analyses Platform (RAP).
HTML MIT License UpdatedJun 30, 2025 -
gwas Public
Forked from nf-core/gwasUNDER CONSTRUCTION: A pipeline for Genome Wide Association Studies
Nextflow MIT License UpdatedMay 13, 2025 -
GLORI-tools Public
Forked from liucongcas/GLORI-toolsbioinformatic pipeline for GLORI
Python MIT License UpdatedMay 19, 2024 -
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