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PowerShell 3 Updated Apr 25, 2026

🛠️ Awesome tools & guides for harness engineering.

2,078 146 Updated Apr 29, 2026

PaperBanana: Automating Academic Illustration For AI Scientists

Python 6,167 450 Updated Apr 23, 2026

Agent OS: Stop prompting. Start specifying.

Python 2,785 267 Updated Apr 28, 2026

OmX - Oh My codeX: Your codex is not alone. Add hooks, agent teams, HUDs, and so much more.

TypeScript 26,668 2,180 Updated Apr 29, 2026

Paper2Agent is a multi-agent AI system that automatically transforms research papers into interactive AI agents with minimal human input.

Jupyter Notebook 2,196 336 Updated Feb 10, 2026

Official repository for EXAONE 4.0 built by LG AI Research

104 8 Updated Aug 4, 2025

Build and run AI agents using Docker Compose. A collection of ready-to-use examples for orchestrating open-source LLMs, tools, and agent runtimes.

TypeScript 933 408 Updated Apr 20, 2026

An AI-powered task-management system you can drop into Cursor, Lovable, Windsurf, Roo, and others.

JavaScript 26,922 2,517 Updated Apr 28, 2026

Biomni: a general-purpose biomedical AI agent

Python 3,027 563 Updated Apr 27, 2026

A beautiful macOS menu bar app for tracking your Claude Code usage in real-time.

TypeScript 790 40 Updated Mar 7, 2026

BioMCP: Biomedical Model Context Protocol

Rust 497 99 Updated Apr 29, 2026

The most accurate document search and store for building AI apps

Python 3,585 299 Updated Apr 2, 2026

Model Context Protocol Servers

TypeScript 84,732 10,531 Updated Apr 17, 2026

Build effective agents using Model Context Protocol and simple workflow patterns

Python 8,297 831 Updated Jan 25, 2026

An awesome repository of community-curated applications of ChatGPT and other LLMs in computational biology

271 27 Updated Apr 16, 2024
R 2 1 Updated Mar 4, 2026

Backend library for conversational AI in biomedicine

Jupyter Notebook 206 56 Updated Apr 15, 2026

Integrating GWAS and spatial transcriptomics for spatially resolved mapping of cells associated with human complex traits.

Python 204 16 Updated Apr 7, 2026

Visualization of Colocalization Between eQTL and GWAS Data

R 88 21 Updated May 13, 2022

A wrapper for liftOver for converting plink genotype data between different genome reference builds

Python 53 21 Updated Feb 1, 2019
HTML 40 2 Updated Aug 29, 2025
HTML 43 3 Updated Mar 23, 2026

[NPJ AI] A foundation model for individual genome modelling

Jupyter Notebook 25 2 Updated Apr 10, 2026

R package for bayesNMf, a computationally efficient Gibbs sampler for Bayesian Poisson NMF which automatically determines the number of latent factors while quantifying uncertainties of the learned…

R 10 1 Updated Oct 26, 2025

a computational framework to identify and characterize cell niches from spatial omics data at single-cell resolution

Jupyter Notebook 53 9 Updated Aug 11, 2025
Jupyter Notebook 135 15 Updated Feb 13, 2025

This folder contains R scripts (and data) to generate figures used in Visscher, Gyngell, Yengo, Savulescu (2024).

R 5 1 Updated Aug 11, 2025
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