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Python package to process electronic structure calculation data (e.g., continuum solvation free energy) and statistical mechanics data (e.g., NASA polynomials) from Gaussian16, Arkane and related s…

Python 3 2 Updated Mar 30, 2026

Molecular Dynamics Simulation Properties Analysis (MD-SPA) will ease the extraction of relevant property information.

Python 3 3 Updated Mar 30, 2026

Functions to generate LAMMPS inputs for alchemical calculations.

Python 3 2 Updated Nov 30, 2025

Converts an xyz file to an RDKit mol object

Python 300 68 Updated Jan 22, 2025

tools for optimizing valence terms in OpenFF force fields

Python 1 Updated Nov 15, 2023

tools for optimizing valence terms in OpenFF force fields

Python 2 Updated Oct 15, 2024

Literally Interpreting esPalOMA parameters

Python 5 2 Updated Feb 5, 2024

internal benchmarking code

Python 1 Updated Mar 12, 2024

Force field fitting analysis utilities

Rust 1 Updated Mar 15, 2024

fix your SMILES

Rust 1 Updated Jun 14, 2024
HTML 1 Updated Aug 13, 2024

Chemical dataset curation

Python 1 1 Updated Dec 21, 2024

Helper for generating qca-dataset-submission submissions

Python 1 1 Updated Sep 10, 2024

This package wraps the package ZENO in a compatible way with MDAnalysis.

Python 2 Updated Jun 2, 2026

This mbuild recipe allows for the generation of complex monomers with controlled tacticity.

Jupyter Notebook 1 Updated Nov 2, 2025

Cookiecutter for mBuild recipes

Python 4 9 Updated Jun 16, 2021

Streaming analysis from running MD simulations.

Python 12 3 Updated Jun 13, 2026

A software tool based on Monte Carlo methods, ZENO computes material properties at nanoscale.

C++ 21 12 Updated Apr 28, 2026

Differentiable, Hardware Accelerated, Molecular Dynamics

Jupyter Notebook 1,421 241 Updated Jun 12, 2026

Store and retrieve RESP/RESP2 partial charges for small molecules

Python 4 1 Updated Apr 16, 2021

Python implementation of the multistate Bennett acceptance ratio (MBAR)

Python 305 99 Updated Feb 12, 2026

the simple alchemistry library

Python 240 58 Updated Jun 1, 2026
Python 3 2 Updated Jul 18, 2022

Additional information about the article "Revisiting the Pseudo-supercritical path Method: An Improved Formulation for the Alchemical Calculation of Solid-Liquid Coexistence"

Python 2 1 Updated Sep 8, 2023

A friendly Python library for multistate analysis with MICS and MBAR

Python 7 1 Updated Feb 3, 2019

Force fields produced by the Open Force Field Initiative

Python 187 27 Updated Jun 8, 2026

A package for atom-typing as well as applying and disseminating forcefields

Python 142 79 Updated Jun 9, 2026

A hierarchical, component based molecule builder

Python 216 81 Updated Jun 12, 2026

Gromacs to Lammps simulation converter

Python 94 23 Updated Dec 9, 2023

Python version of the amazing Reaction Mechanism Generator (RMG).

Python 523 256 Updated Jun 13, 2026
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