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A genome diagram generator for microbes and organelles

Python 131 6 Updated Jun 17, 2026

My exposition of the formalization of Hegel's theory in modal homotopy type theory

TeX 14 1 Updated Aug 18, 2023

Experimenting with Rust's fundamental data model

Rust 61 13 Updated Feb 10, 2026

Baochip 1x Silicon

SystemVerilog 366 32 Updated Jun 1, 2026

egg is a flexible, high-performance e-graph library

Rust 1,767 195 Updated Apr 14, 2026

The collected works of F. W. Lawvere

381 43 Updated Sep 6, 2024
Haskell 10 3 Updated Sep 28, 2025

FFmpeg Assembly Language Lessons

12,072 400 Updated Feb 22, 2026

Oxidized Astrodynamics

Rust 377 13 Updated Jun 13, 2026

Visualize Ownership and Lifetimes in Rust

Rust 5,152 111 Updated Jun 17, 2026

LD_PRELOADable library for exploring the glibc heap

C 108 Updated Mar 6, 2025

Macro to generate bitfields for structs that allow for modular use of enums.

Rust 226 51 Updated Dec 6, 2025

Repo for PrimerSchemes

HTML 17 13 Updated Jun 10, 2026

Hierarchical binned indexed data store for on-disk genomic data.

Rust 13 Updated Jan 18, 2025

A tool for generating consensus long-read assemblies for bacterial genomes

Rust 231 21 Updated Apr 27, 2026

The Python toolkit for computing with string diagrams.

Python 425 75 Updated Jun 17, 2026

An optimised interval tree for efficient interval stabbing

Rust 24 7 Updated Apr 16, 2026

Single-Cell RNA-seq pseudo-aligner

Rust 52 13 Updated May 6, 2024

Foundations for the Rust omics ecosystem.

Rust 16 7 Updated Mar 19, 2026
Jupyter Notebook 2 Updated Aug 30, 2021

Rust on the Quansheng UV-K5 Radio

Rust 11 Updated Jul 9, 2024

Example genomics data for tool developers

Shell 119 2 Updated Jul 7, 2024

Fast and exact gap-affine partial order alignment

Rust 68 7 Updated Apr 25, 2026

Ampseer examines reads in fastq format and identifies which multiplex PCR primer set was used to generate the SARS-CoV-2 sequencing library they are read from. It is intended to differentiate betwe…

Rust 15 1 Updated Feb 27, 2024

Tutorials, examples, discussions, research proposals, and other resources related to fuzzing

C++ 3,772 448 Updated Oct 24, 2024

Exercises to learn how to fuzz with American Fuzzy Lop

C 1,277 201 Updated Oct 12, 2022

Tools to explore Minimum Decycling Sets (MDSs) of the de Bruijn graph

C++ 11 1 Updated Sep 11, 2025

Rust bindings for the Python interpreter

Rust 15,797 978 Updated Jun 17, 2026

Create book from markdown files. Like Gitbook but implemented in Rust

Rust 21,801 1,863 Updated Jun 8, 2026
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