Stars
Epidemiology modelling framework for the Thanzi la Onse project
Run Windows apps such as Microsoft Office/Adobe in Linux (Ubuntu/Fedora) and GNOME/KDE as if they were a part of the native OS, including Nautilus integration. Hard fork of https://github.com/Fmst…
A central repository to coordinate code reviews between researchers at the University of Oxford
R Package for individual based epidemiological models
C code of the individual-based model developed as part of the HPTN071 (PopART) trial
A fast, simplified version of TERGM-based simulation for epidemic modeling
A community driven list of useful Emacs packages, libraries and other items.
A comprehensive list of auxiliary files used by LaTeX
ggplot extension: options for tailored facets, multiple colourscales and miscellaneous
Use RMarkdown to generate PDF Conference Posters via HTML
COVID-19 Agent-based Simulator (Covasim): a model for exploring coronavirus dynamics and interventions
Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nature Communications (2022).
A Julia package for the creation, manipulation and analysis of the structure, dynamics and functions of multilayer graphs.
R package for easier interactions with the Go.Data API
Mathematical Modeling of Infectious Disease Dynamics
atom-community / atom
Forked from atom/atom
Community build of the hackable text editor
A modular Bayesian framework for real-time infectious disease surveillance. Provides tools for nowcasting, reproduction number estimation, delay estimation, and forecasting from data subject to rep…
Source files for building the IDM EMOD disease transmission model.
Statistical Rethinking course winter 2022
Create synthetic populations for COVID-19 epidemic analyses.
Updates to the synthetic contact matrices
API Scripts created by the community for use in Roll20 VTT. Submit a ticket at roll20.net/help if critical hotfixes are to be requested.