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Showing results

Terminal based spreadsheet tool

Go 2,257 59 Updated May 27, 2026
Python 2 Updated Apr 16, 2026

Metro-map-style SVG diagrams from Mermaid graph definitions, designed for visualizing bioinformatics pipeline workflows

Python 78 5 Updated Jun 13, 2026

Expose the contents of .docx files without leaving your terminal. Fast, safe, and smart — no Office required!

Rust 3,695 90 Updated Jun 2, 2026

Comprehensive list of color palettes available in R ❤️🧡💛💚💙💜

R 1,700 145 Updated Jun 1, 2026

Modern open-source time-tracking app

PHP 8,684 456 Updated Jun 10, 2026

simple terminal UI for git commands

Go 79,255 2,862 Updated Jun 10, 2026

A list of interesting genome browser and genome visualization programs

TypeScript 1,086 136 Updated May 27, 2026

Fast DNA search and [host] depletion using minimizers

Rust 112 16 Updated Apr 14, 2026

nf-core/taxprofiler post-processing; verification of classification results; consensus maps

Nextflow 10 4 Updated Jun 10, 2026

Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

C 1,750 576 Updated Mar 22, 2025

Chrome and Firefox extension for Conventional Comments in GitHub UI.

JavaScript 123 14 Updated Jan 7, 2026

A flexible pipeline for complete analysis of bacterial genomes

Nextflow 517 80 Updated May 21, 2026

Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines

Groovy 53 31 Updated May 7, 2026

Coordination and configuration files for the archaeo.social Matrix server

1 Updated Aug 8, 2023

A fast and accurate binning refinement tool to constructs high quality MAGs from the output of multiple binning tools.

Python 50 2 Updated Feb 5, 2026

The Stickers Standard

Bikeshed 469 32 Updated Jan 22, 2026

A repo with just adapter sequences

15 1 Updated Jul 7, 2025

A MIxS extension proposal for 'ancient' samples

Jinja 4 Updated May 18, 2026

Pipeline to fetch metadata and raw FastQ files from public databases

Nextflow 194 92 Updated May 29, 2026

(Meta-)genome screening for functional and natural product gene sequences

Nextflow 112 36 Updated Jun 9, 2026

Parallelised and automated construction of metagenomic classifier databases of different tools

Nextflow 21 11 Updated Jun 11, 2026

Assembly and binning of metagenomes

Nextflow 302 153 Updated Jun 10, 2026

µbinfie blog

HTML 19 8 Updated Jul 21, 2025

Tools and pipelines tailored to using PacBio HiFi Reads for metagenomics

HTML 201 35 Updated Apr 3, 2026

Nextflow runs monitoring and organisation UI

TypeScript 77 14 Updated Sep 20, 2024

WeekToDo is a Free and Open Source Minimalist Weekly Planner and To Do list App focused on privacy. Available for Windows, Mac, Linux or online.

Vue 2,101 231 Updated Jul 20, 2025

Lord of the Rings Password Generator

R 3 Updated Nov 10, 2024

Pympress is a simple yet powerful PDF reader designed for dual-screen presentations

Python 1,606 104 Updated Mar 29, 2026

Simple test framework for Nextflow pipelines

Java 187 44 Updated Apr 27, 2026
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